Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01619 ATGTCACTTGCTGGTAAAATCACCTCTGAAATTGGGGTTCATGCAACCGCTGCCAAGTGGTTCAACCTCTTTGCCACACAACTTCATCATGTTCAAAACCTCACTGATAGGGTTCATGCTACCAAGCTGCATCATGGTAATGACTGGCATCACAATGAGTCCGTCAAACACTGGACTTATACCATAGATGGTAAGGTTACAACATGTCTGGAGAGTATTGAATCCGTTGATGAACAGAACAAAACAATCACCTACAAGCTCTTTAGTGGAGACATCGATCGCCAGTTTAAGGTCTTTAAGTTCATCTTTCAAGCAATTGATAAGGGTCATGGTGCTATTATCAAATGGACCGTTGAATATGAGAAGAATGATGATGAAGTTGATCCTCCATATGGCTACGTCGAGTACCTGCACACAGGCACTAAAGATATTGATGCTCATCTTCTCAAGGCATAG 456 0.4211 MSLAGKITSEIGVHATAAKWFNLFATQLHHVQNLTDRVHATKLHHGNDWHHNESVKHWTYTIDGKVTTCLESIESVDEQNKTITYKLFSGDIDRQFKVFKFIFQAIDKGHGAIIKWTVEYEKNDDEVDPPYGYVEYLHTGTKDIDAHLLKA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01619 151 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
Cca04g01619 151 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
Cca04g01619 151 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 149 - -
Cca04g01619 151 SUPERFAMILY Bet v1-like 1 150 - -
Cca04g01619 151 PANTHER MLP-LIKE PROTEIN 423 1 149 - -
Cca04g01619 151 Gene3D - 1 151 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01619 Cca-Chr4 24830325 24832007 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01619 - - gmx:100527208 269.626