Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01617 ATGTTCTATATAACCCGTATATGGTTGCCATACTCTCATCCATCTTGCTTTGTTCCATTACTTGCTTCTCTCTTGATCATGTCACTTGTAGGCAAAATCAGCACTGAAATTGGGGTTCACGCAACCGCTGAAAAGTGGTTCGACCTCTTCGCAAAGCAACTCCATCATGTTCAAAACCTTACTGATAGGGTTCATGGAACAGAGCTGCATCATGGTGATGACTGGCATCATACGGAGTCCATCAAACACTGGACTTATACCATAGATGGTAAGGTTACAACATGTAAGGAACGTGTTGAATCCGTTGATGAACAGAATAAAACAATTAACTACAAGCTCTATGAGGGAGATATCGATCATAAGTATAAGGACTTTAAGCTCATCTTTCAAGCCATTGATAAGGATCATGGTGGTGCTATTATCAAATGGACCGTTGAATATGAGAAGATTGATAATGAAGTTGATCCTCCATATGGCTACATCGAGTATGTGCACAAATGCACTAAAGATATTGATGCTCATCTTCTCAAGGCATAG 537 0.4004 MFYITRIWLPYSHPSCFVPLLASLLIMSLVGKISTEIGVHATAEKWFDLFAKQLHHVQNLTDRVHGTELHHGDDWHHTESIKHWTYTIDGKVTTCKERVESVDEQNKTINYKLYEGDIDHKYKDFKLIFQAIDKDHGGAIIKWTVEYEKIDNEVDPPYGYIEYVHKCTKDIDAHLLKA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01617 178 Gene3D - 27 178 IPR023393 -
Cca04g01617 178 SMART Bet_v_1_2 28 178 IPR000916 GO:0006952
Cca04g01617 178 CDD Bet_v1-like 31 157 - -
Cca04g01617 178 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 27 176 - -
Cca04g01617 178 PANTHER MLP-LIKE PROTEIN 423 27 176 - -
Cca04g01617 178 SUPERFAMILY Bet v1-like 27 177 - -
Cca04g01617 178 Pfam Pathogenesis-related protein Bet v 1 family 28 177 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01617 Cca-Chr4 24732863 24734574 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01617 - - gmx:547541 278.1