Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01544 ATGGCATTCTATTCCTGGTTTTGTGTTCTGAGCTTAACTGTTCTGTGGTCACTGGCATCACCACTGTACCATGTTCAAGGACATGGTTGTGATTTTTCTTTGGGAAAATGGGTTATTGATGACTCCTATTACCCTCTTTATGATGCTTCAAGGGATTGTCCCTTCATAGGGCAGGGATTTGATTGCCTAAAAAATGGTAGACCTGATCTGGAATATCTCAAGTATAGATGGAAGCCCTCAAGTTGTGATCTTCCTAGGTTTAATGGGGTGGATTTCTTGGAGAGATACAGAGGGAAGAAGATAATGTTTGTGGGAGACTCCATAAGCAACAATATGTGGCAGTCACTTACTTGTTTGCTTCACATTGCTGTCCCACAATCAAACTATGCCTTACAAACTCCAACAAAGCAGCTCTCTGTGTTCACATTTCTGGAATATGATGCTTCAATAATGTGGTTGAAAAATGGGTTCCTAGTGGACGTGGTTCATCACAAAGAAAAAGGCAGAATTGTGAAACTGGACTCCATTAAATCTGCAAATAAGTGGAATGGAGTAGATGTGTTGATTTTCAATACCTATCATTGGTGGACCCACTCACAAGATTCTGAATCATTGGTTCAATTTCAAGTAGGCAATGAGATAATAAAAGACATGGATCCCATGGAAGCCTTCAAGATTGGGTTAACAACTTGGTCTAAATGGGTTGATGCTAACATTGATCCCTCAAAGACTACAGTTTTGTTCCAAGGAATTGCTGCATCCCATTATGAGGAAAAAGGGTGTCTCAATCAAACTCACCCATATCAAGGACCACAGCCACCTTATCCTGGTGTAGAAATTGTGCAGAAAGTTTTGAGTAGTATGTCATGTCCTGTATATTTGCTTGACATTACTTTGATGACACAAATGAGGATAGATGGACACCCTTCTATTTTCACAGGCAAAGGCCCTTCTTATGAGGACTGCAGTCACTGGTGTCTAGCTGGTGCTCCTGATACTTGGAATGAAATCCTTTCTGCTGCTTTGCTTGGACTTTAA 1038 0.4075 MAFYSWFCVLSLTVLWSLASPLYHVQGHGCDFSLGKWVIDDSYYPLYDASRDCPFIGQGFDCLKNGRPDLEYLKYRWKPSSCDLPRFNGVDFLERYRGKKIMFVGDSISNNMWQSLTCLLHIAVPQSNYALQTPTKQLSVFTFLEYDASIMWLKNGFLVDVVHHKEKGRIVKLDSIKSANKWNGVDVLIFNTYHWWTHSQDSESLVQFQVGNEIIKDMDPMEAFKIGLTTWSKWVDANIDPSKTTVLFQGIAASHYEEKGCLNQTHPYQGPQPPYPGVEIVQKVLSSMSCPVYLLDITLMTQMRIDGHPSIFTGKGPSYEDCSHWCLAGAPDTWNEILSAALLGL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01544 345 Pfam PMR5 N terminal Domain 29 83 IPR025846 -
Cca04g01544 345 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 84 340 IPR026057 GO:0016740
Cca04g01544 345 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 7 344 - -
Cca04g01544 345 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 7 344 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01544 Cca-Chr4 22429545 22432685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01544 - - gsj:114368211 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01544 04 22429545 22432685 Cca04g01544 04 22429545 22432685 ECH