Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01514 ATGGCCAACGAAGTAGAAGTGTCTGGCAAAGTTGCAGGCGATAAATACAGATCTTACATACATGATGAGGCTGATACAACCCTCTGGAGACATGGAGGACCACCCCTCTATGATGATGTGAACAAGCTTTTTGAAGAAGGGCGAACCAAGGAATGGCCTAAAGGATCATTAGAGGAGATCGTGCAAAACGCTATAAAATCATGGGAGATGGAGCTCTCACACAAAACCCGCTTGCAGGATTTCAAGACTATAAATCCTGAAAAGTTCAAGATCTTTGTTAATGGGAGGGAGGGATTATCTGCAGAGGAAACTCTAAGCATAGGAAGTTATAATGCTTTGTTGAAGAACTCGTTGCCACAAGAATTGAAGTATTACAAAGCTGATGAAGAGAGCTTTGAATCATCTCATGAAGCATTCAGATCAGCTTTTCCTCGTGGATTTGCATGGGAAGTGATCAAAGTATATACTGGACCCCCTGAAATTGCTTTTAAGTTTAGGCACTGGGGCTTCTTTGAGGGTCCTTTCAAGGGACATGCCCCTACTGGCAAGATTGTTCAATTCTATGGCTTGGGAACTCTCAAGGTTGACAACTCTCTGAAAGTGGACGAGGTGGAGATATACTATGATCCAGCAGAGTTGTTGGGAGACCTTCTGTCTGGAGGCAATGACAACAAAACTTCATCATCTTCTCAAGGATATTGTCCTTTCTCCAAATAA 717 0.4282 MANEVEVSGKVAGDKYRSYIHDEADTTLWRHGGPPLYDDVNKLFEEGRTKEWPKGSLEEIVQNAIKSWEMELSHKTRLQDFKTINPEKFKIFVNGREGLSAEETLSIGSYNALLKNSLPQELKYYKADEESFESSHEAFRSAFPRGFAWEVIKVYTGPPEIAFKFRHWGFFEGPFKGHAPTGKIVQFYGLGTLKVDNSLKVDEVEIYYDPAELLGDLLSGGNDNKTSSSSQGYCPFSK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01514 238 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 1 224 - -
Cca04g01514 238 PANTHER - 1 224 - -
Cca04g01514 238 Gene3D - 117 218 - -
Cca04g01514 238 SUPERFAMILY NTF2-like 130 215 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01514 Cca-Chr4 21614031 21616825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01514 - - btab:109042025 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01514 04 21614031 21616825 Cca04g01514 04 21614031 21616825 ECH