Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01512 ATGCAACTCACCTCACATTTTCTTCCTGAACCACCCACTGAGTACTTTGAGGTAACCAAACCCATTGAACTCCCCAAAACAAAACCTTGCTCACACCACATTCTCCACCACGACTTCGGCTTCACCTATGGTCAACCCCCGGTTCTTGCTAACTACACCCCTCCCTCTCACTGCCCCTCTCACACCTTCTCCAAAATCGTTCTTGAGTGGAAAGCCACGTGTAAAGGATCACAATTTGATCGCATTTTCGGTGTGTGGCTTGGTGGGGTTGAGCTTCTTAGAGGCTGCACCGCAGAGCCAAGAGCCACCGGCATTGTTTGGAGTGTCCAGAAGGACATCACAAGGTACCACTCTTTGTTTTCAACTCCCCAAACCCTTGCTGTTTTTCTGGGAAACGTTGTGGACCAAACCCACACTGGGGTTTACCATGTTGATATCACCATTCACTTTTATCCTTCCAATGATGATGTTTCAAACTCAAAGGTTGGAGCTTTGGCATTTGGGGGTGGTGTTCCTGCGGATTTGGTCCTGCCCATTTCAAGGAACCTTCCACTGAATGATGGGTTGTGGTTCAGAATTGAGAATTCCACTGATAGGGGTTTGAAGGAGTTCAAGGTGCCACAAAATGCCTATAGGGCTGTTTTGGAGGTTTATGTTTCATTTCATGAGATGGATGAGTTTTGGTACACTAACCCTCCTGATGAGTATCTTAATGTTGCCAAAAACCTCAGTAATGTGCGTTGGGGTGGTTCATTTAGGGAGGTTTTGGTTTCTCTTGATGGGAATCTTGTTGGTGCAGTTTGGCCTTTTACTGTGATCTACACTGGAGGGGTTAATCTCTACTTGTGGAGGCCTATCACTGGGATTGGCTCATTTGATCTTCCATCTTATGATATTGAGGTTACACCCTTTTTGGGGACTTTGTTGGATGGGAAGAGCCATTTGGTGAGGTTCAACGTGACAAATGCATTGAATGTTTGGTTCATAGATGCAAATTTGCATCTTTGGTTGGATGGGAAGAGCAGTAGAACAGAAGGAGGACTTGAGGAACTTGTTGACAAGCCTTTGGCTGTGTCTTTGGCTTATGACTTTCAAGGTTTGAATGGAAGCTTCAGTACTAGTGCAAAGAGGTCCATTTTCTCCTCCGGATGGATCAGATCCTCCTACGGAAATATCACTACAACTTTTGCTCAAGATTTTGTTTACAACAATTCAATGGTGATAGGGAACAATGGGAATGAGAACATTGTGAATCAAGTGATTCTTTTAAATGAAAGTGTTCATGCTAACCTTTCATCACCCTTTGTTGATGATACATACAGAAATTTTTCCCTATACTCGGACGAGTATGGGATGGATAAGGATGGCTATACTTTAGTTTTGTCGAATGTTACGTTGGGATTTGAAGAAAACAAGTCTAGGAGTTCGGCTTTTGGATTTCCAAAGAGTGCTCTAAAAAATGTGCAGAATGGGAAGGCTATTATGGTTATGAAAGGGGACTTGGTTGTTAACGGACTTGGTAAAACAAAGCAAGATTACAGTTACACAAGTGATGGATATTGCTATTCTAGGAAAGTTGGCAGCTCAAATTACACAATTCTCTTCGATGAAGTTACATATTCATGTAACTAA 1632 0.4301 MQLTSHFLPEPPTEYFEVTKPIELPKTKPCSHHILHHDFGFTYGQPPVLANYTPPSHCPSHTFSKIVLEWKATCKGSQFDRIFGVWLGGVELLRGCTAEPRATGIVWSVQKDITRYHSLFSTPQTLAVFLGNVVDQTHTGVYHVDITIHFYPSNDDVSNSKVGALAFGGGVPADLVLPISRNLPLNDGLWFRIENSTDRGLKEFKVPQNAYRAVLEVYVSFHEMDEFWYTNPPDEYLNVAKNLSNVRWGGSFREVLVSLDGNLVGAVWPFTVIYTGGVNLYLWRPITGIGSFDLPSYDIEVTPFLGTLLDGKSHLVRFNVTNALNVWFIDANLHLWLDGKSSRTEGGLEELVDKPLAVSLAYDFQGLNGSFSTSAKRSIFSSGWIRSSYGNITTTFAQDFVYNNSMVIGNNGNENIVNQVILLNESVHANLSSPFVDDTYRNFSLYSDEYGMDKDGYTLVLSNVTLGFEENKSRSSAFGFPKSALKNVQNGKAIMVMKGDLVVNGLGKTKQDYSYTSDGYCYSRKVGSSNYTILFDEVTYSCN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01512 543 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 11 543 IPR021102 -
Cca04g01512 543 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 28 429 IPR021102 -
Cca04g01512 543 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 11 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01512 Cca-Chr4 21587426 21589057 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01512 - - gmx:100783515 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01512 04 21587426 21589057 Cca04g01512 04 21587426 21589057 ECH