Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01458 atgttgcactctcatcagcaccttctcttctcaaccctccctgttcctctctcactcACCCATCATCACCACCACCACCCTTCACCATCTCTTATTTTTCTCCATAGACCCATCacaacaacaacaacaacaGTTTCAGCCATTCCTTATGATGCATGGCTTGCACAACTCACAACAACACAAGAATTACTGGGAGGAGGACCCATTGAACTCCCTTTTTCCACTCCTTCAGTTTTCACAGATGAGCCTTCATCTTCTACCCTTCAGCTTGCTTCCACCCTCCTTCTCTCAGGAGCCATTGCTCTCTTCCTCTTTCGCTCCATACGCCGACGGGTCAAACGTGCCAAACAATTGAAATTTAGGTCTTCAGGAGTGAACAAGTCACTGGATAGCTTGAATGCTATGAGGTCAAGTTCCATCAAAGCCAAGAATCCACCTTCACCTGACCAAGCATTGTTAGGGGCAGTTATAGCAGGTGTTATTGCTGTTTTCCTCTACAGGTTCACCACATCTATTGAGTCTTCTCTCGGACGCCAAACACTTTCAGATAATTTCTCAGTTCGTCAGATAACAATCACTATAAGGACAATAATAAATGGCTTGTGCTACCTTGCTACATTTGTCTATGGCATCAACTCTGTTGGTTTATTTCTTTATTCTGGCCAGCTTGCCATGGACACCATTGTGGGAGGCTCAACTGGAAAGGAATCTGAAAGCAAAATCATTAAGCAGCAAGTTCAGAATCTCACAAATAATAAACTGAGCAACACAAAGGAAGATCAAGGTTCAAATAATTCACTATAA 804 0.3905 MLHSHQHLLFSTLPVPLSLTHHHHHHPSPSLIFLHRPITTTTTTVSAIPYDAWLAQLTTTQELLGGGPIELPFSTPSVFTDEPSSSTLQLASTLLLSGAIALFLFRSIRRRVKRAKQLKFRSSGVNKSLDSLNAMRSSSIKAKNPPSPDQALLGAVIAGVIAVFLYRFTTSIESSLGRQTLSDNFSVRQITITIRTIINGLCYLATFVYGINSVGLFLYSGQLAMDTIVGGSTGKESESKIIKQQVQNLTNNKLSNTKEDQGSNNSL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01458 267 Pfam Protein of unknown function (DUF3082) 146 223 IPR021434 -
Cca04g01458 267 PANTHER OS02G0307800 PROTEIN 17 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01458 Cca-Chr4 20210627 20215167 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01458 - - gmx:100783357 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01458 04 20210627 20215167 Cca04g01458 04 20210627 20215167 ECH