Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01452 ATGGACGATCCAACTCAACTCCTCGAAGCAGCTTCTGATTTTGCTAACTACCCAGGGCTGCTAAGCGATGATTCCGCTAGGGACTTTCTCAATCGCTTCCCTCTCCCGCTCATTATCAATGCGTTACAGACTCAATTTGATGTGCCTGGCCTAGAAAGTACTCTAGTTGCATGCCTTGATAGGTTATTCAATACGAAGTTTGGCGCTTCTTTGATCCCACAGTATATGCCTTTTGTTCAAGTTGGTTTGCAGACAGATTCTCAAGCAGTCAGATCCTTAGCTTGCAAAACAGTCACTTGCCTTCTAGAGAATATTGACAATGATTACAAAGTTGCTGTTCGACTAATTGAAGACTCTAACATATATCCTCTTTTGCTTGATTGCCTTATAAATGGCAATGAACAAGTGGCAGCTGTGGCAACGGATGCAATTAAAATGTTAGCTGGTTTTCCTGAAGGCATGGAAATTATCTTTCCATCTGCCAAAGAGGGTGGTACAGACCTAGCGATTTTTGCATCAAAATGTTCATCACTGGGTCGAGTTCGTGTACTGGCTTTAGTGGTGAAGCTTTTTTCTGTATCTAGGTCAGCAGCATCTACCATTTACAGATCAAATCTACTTAAATTGTTGGAAGCAGAAATCAGAAATGCAGATGATACCCTTGTAACTTTAAGTGTTTTGGAGCTTTTATATGAGCTAGCAGAAATTGAACATGGTACAGAATTTTTGTCAAAGACTAGCATCCTTCAATTGCTTTCATCAATAATTAGCAACAATTCTATGGAATCAATTTTAAGATCAAGAGCAATGATGATAATTGGAAGGCTACTGTCCAAGGACATTATATACTCCTTCACAGATGAACCTTGTGTTATAGCTGTTATTTCATCTATTGACGGTAGACTTCAGTCATTGGAACCTTCAGATAGAGATGAATGTGAAACTGCACTTGAATCATTGGGTCAAATGGGATCATCTGTCCAAGGAGCCACATTACTACTCTCAGGTTTATTGCCTGCTGCTAGACATGTTATATATGCCGCTTTTGATCGACAAGGACCACAAGGACATGGTAAACAGCTGGCTGCATTGCATGCTCTTGGAAATATCTCGGGAGAAACCAGATCTGAGAGTAACATCATACTGAATGCTGAAGCAGAAGAAAACCTGCGACGCCTAATATATGAAACAGCATCCAGAAGCTCAAAGTTGACACCATCGGGTCTTTTTCTGTCTGTTTTGCAGCAGGATTCAGAAATACGTCTAGCGAGCTATAGAACGATAAGTGGATTGGTTGCCCGACCATGGTGCTTGATGGAGATATGCTCAAAACAAGAGATTATAGATAAAGTGACCAACCCGAGTACTGAAACCACAAAAATAGGTATGGAAGCTAGATATAACTGCTGCAAGGCGATACAAAGATCATTGACATTGTCTAGTAGAGTTTCTGCTGATCCTGCTTTTGCAGGAATAGCAGCAAAGTTGCAGGAAGCTATTGGAATGGGTCCATATCTTGTTAAAAAAAGGGTTGAAGTTCAACCTATTGTGGAGACGGCTGACAGATTTTAG 1572 0.4078 MDDPTQLLEAASDFANYPGLLSDDSARDFLNRFPLPLIINALQTQFDVPGLESTLVACLDRLFNTKFGASLIPQYMPFVQVGLQTDSQAVRSLACKTVTCLLENIDNDYKVAVRLIEDSNIYPLLLDCLINGNEQVAAVATDAIKMLAGFPEGMEIIFPSAKEGGTDLAIFASKCSSLGRVRVLALVVKLFSVSRSAASTIYRSNLLKLLEAEIRNADDTLVTLSVLELLYELAEIEHGTEFLSKTSILQLLSSIISNNSMESILRSRAMMIIGRLLSKDIIYSFTDEPCVIAVISSIDGRLQSLEPSDRDECETALESLGQMGSSVQGATLLLSGLLPAARHVIYAAFDRQGPQGHGKQLAALHALGNISGETRSESNIILNAEAEENLRRLIYETASRSSKLTPSGLFLSVLQQDSEIRLASYRTISGLVARPWCLMEICSKQEIIDKVTNPSTETTKIGMEARYNCCKAIQRSLTLSSRVSADPAFAGIAAKLQEAIGMGPYLVKKRVEVQPIVETADRF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01452 523 SUPERFAMILY ARM repeat 82 474 IPR016024 -
Cca04g01452 523 Gene3D - 35 403 IPR011989 -
Cca04g01452 523 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 3 523 IPR019538 GO:0043248
Cca04g01452 523 Pfam Proteasome non-ATPase 26S subunit 70 513 IPR019538 GO:0043248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01452 K06692 - gmx:100785671 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01452 04 19929701 19947936 Cca04g01452 04 19929701 19947936 ECH