Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01449 ATGGATCAAGATGATGTCTCTCAAAGTATTGATGAGATTTGCATTAGTTCAATATTTCATGAAGTTGAGGATATAAATGTGAGCATTTCACATGCTGCTGATTCTATTGGTTTGAAGGAGATACCAAGATATGTGGTTAAAACTAATGAGGAGGACTGGGTGAAGAAATCTCAGGAATCATTTCATCCAGTTCAAGTTACTGAAGGCCTATGGGTGGTGCCCAAGTGGTGCACTCCACCAGATGTTCAAGCAACAAATATATTTGTCAATCCAGGACTTGCCTTTGGAACTGGAGAACACAGCACTACCAAACTCTGTCTATTACTCTTACAAGGTTATATTAAAGGAGGTGAGCACATTCTGGACTATGGCACAGGAACTGGAATTCTTGCAATTGCTGCTCTTAAGTTTGGAGCTGCCTTTGCTGTTGGAGTTGATGTAGATTCACAAGCAATTGCATCAGCATCGGAAAATGCTTCCCTGAACAACATCGGACCAGACAAACTGCAACTGCACCTGGTTTCCTGCAAAGCCTCTTCATCCTCCCAAAATGACTTGACATTTGGAGTTATGGAGGGACAAAACACTTGTGAGATACAAGCAGTCATTACTCACAGGGATAAGTTTGATGTGGTCATTGCAAATATACTCTTAAATCCTTTACTGGATCTTGCTGATCAAATTATTTCTTTAGCAAAGCCTGGAGCAGTTGTTGGTCTCTCTGGTATCTTATCTGAGCAGGTCCAGTACATCGTAGAAAGATATTCACCATTTTTGGAAGGCATAGAAGTGTCCAAAATGGATGACTGGGCCTGCGTGAGTGGCAGAAAAAAGTAG 837 0.4134 MDQDDVSQSIDEICISSIFHEVEDINVSISHAADSIGLKEIPRYVVKTNEEDWVKKSQESFHPVQVTEGLWVVPKWCTPPDVQATNIFVNPGLAFGTGEHSTTKLCLLLLQGYIKGGEHILDYGTGTGILAIAALKFGAAFAVGVDVDSQAIASASENASLNNIGPDKLQLHLVSCKASSSSQNDLTFGVMEGQNTCEIQAVITHRDKFDVVIANILLNPLLDLADQIISLAKPGAVVGLSGILSEQVQYIVERYSPFLEGIEVSKMDDWACVSGRKK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01449 278 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 41 276 IPR029063 -
Cca04g01449 278 PIRSF RPL11_MTase 5 278 IPR004498 GO:0006479|GO:0008276
Cca04g01449 278 Coils Coil 276 278 - -
Cca04g01449 278 Pfam Ribosomal protein L11 methyltransferase (PrmA) 7 278 - -
Cca04g01449 278 Gene3D Vaccinia Virus protein VP39 60 278 IPR029063 -
Cca04g01449 278 CDD AdoMet_MTases 120 238 - -
Cca04g01449 278 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 6 278 - -
Cca04g01449 278 Hamap Ribosomal protein L11 methyltransferase [prmA]. 3 277 IPR004498 GO:0006479|GO:0008276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01449 - - gmx:100797477 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01449 04 19837464 19842949 Cca04g01449 04 19837464 19842949 ECH