Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01429 ATGGAAATGAGCTTAAGGCTCCAAGACACAGAAACTCCACCTTCCATGAACTCCCCAAGGAGCAATCTCAGCAACAACAATAACATTGGCATCCAAATCCCCACCACACCAAAATCCATCCCCAGATCTGACTCCACCCCTTACCCTACCACCTTTGTCCAAGCTGACACATCCACTTTCAAGCAAGTAGTTCAAATGCTCACAGGCTCATCAGAATCCACAAAACTACACCCTCAACAACAAGATCCAATTCCACCACAACCATCCAAGAACTTCAACATCCCTCCAAAGAAGCAGCAAGGGTTCAAGCTGTATGAGAGGAGGaacaacaacaacaacaacctcaagaacaGCCTCATGATCAACACCTTGGTCCCCAATTTTGCACACAACAACATCTCAGGATTCTCCTCACCCCACAAGCCAGAGATCCTCTCCCCAAGCCTTCTTGACTTCCCTTCCCTCACTCTCAGCCCTGTCACTCCATTGAATCATCATGACCCTTTTGACAAGTCCTCACCTTCATTGGGAAGCTCTTCATCATCAGAGGAAGAGAGAGCCATAGCTGAAAAAGGGTTCTACTTGCATCCCTCTCCCATGTCAACTCCAAGAGAATTTCAGCCTCAGCTCTTGCCTTTGTTCCCTGTCACTTCACCTAGAGTTTCAGAGTCACCCTCTTGA 681 0.4596 MEMSLRLQDTETPPSMNSPRSNLSNNNNIGIQIPTTPKSIPRSDSTPYPTTFVQADTSTFKQVVQMLTGSSESTKLHPQQQDPIPPQPSKNFNIPPKKQQGFKLYERRNNNNNNLKNSLMINTLVPNFAHNNISGFSSPHKPEILSPSLLDFPSLTLSPVTPLNHHDPFDKSSPSLGSSSSSEEERAIAEKGFYLHPSPMSTPREFQPQLLPLFPVTSPRVSESPS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01429 226 Pfam VQ motif 47 72 IPR008889 -
Cca04g01429 226 PANTHER VQ MOTIF-CONTAINING PROTEIN 33 1 224 IPR039828 -
Cca04g01429 226 MobiDBLite consensus disorder prediction 1 47 - -
Cca04g01429 226 MobiDBLite consensus disorder prediction 70 94 - -
Cca04g01429 226 MobiDBLite consensus disorder prediction 8 47 - -
Cca04g01429 226 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 1 224 IPR039611 -
Cca04g01429 226 MobiDBLite consensus disorder prediction 163 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01429 Cca-Chr4 19063057 19064870 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01429 - - gsj:114378181 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01429 04 19063057 19064870 Cca04g01429 04 19063057 19064870 ECH