Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01427 ATGGCTGCTGAGGTTGTGGGATTTGAGATGGTTGAAGGGCCACCGGAAACCGGTGCTGAAGGAGACAAATCTGTTTCACAAGAATGTGAAAATGGGAAATTGGAGCAAGATGAAGGAGCTGCAGAGCCCATAAAATTCGAGTCACATGAAGATGAATCTGCTAAAGCTGAAGGGAATGTTGTTTTAGATAACAATGTTCCCAAAGAAGCAGCTGAAGAGTGGCCTGCACCGAAGCAGATACTTTCTTTTTATTTTGTTAGGTTCCGGCCTTATGATGATCCTAACATTAAAGCTAAACTTGATAAGCTTGATAAGGAGATTAGCCAGAAAAATCAAGCACGAATTCAGGTTACCGATGCTTTAAGGGCAAAAAGGTCAGAACGAGCAGAGTTGATTTCTCAGATTAAGTCTCTAAGAGACAACAACAGGCAATTTCAGAGTATTGTTGATGAAAAAATAAAAGAGATTGAACCTCTGCAGCAGGCACTTGGCAAGCTTCGTACCACCAATAGTGCAGGTCGAGGGGCTGGACTGTGCTCATCTGAGGAGGAACTTAACAGTATTATCAATAGCTTGCAATACCGCATACAGCATGAGAGCATTCCATTGGCCGAAGAAAAACAAATCCTTAGAGAAATCAAGCAACTTGAGGGGACAAGGGAGAAGGTTATTGCTAATGCTGCCATGAGAGCCAAAGTACAAGATTCGATGGGGCAGAAAGAGGCCATTCAAGATCAGGTTAAGCTTATAGGTGGTGACTTGGATGGAGTTAAAAAAGAGAGGCAAGCAATTCGGTCCAAAATCAAGCAACTTGATGATGGAATACAAGCCTTAGACAAGGATATCATGTCTTTACAGGATGAACTAGCAGCTATTACTGAAAAGAGGGAAAAAGCTTATGAGAGCATTCAGCAGCTAAGAAAACAACGTGATCAAGGGAACTCCAATTTCTACCAAAGCCGGACAATTTTGAACAAGGCACGGGAGCTTGCAGCTAAAAAAGATATTAATGCACTTGAGGAACTTTCACAAACTGAGGTTGAGAAAGCTATGTCATTCTGGAACAGTGACAAATCCTTTAGGGATGATTATGAGAAAAGACTTTTGCCATCACTGGACATGCGGCAGTTGAGTAGGGATGGACGGATGAGGAACCCAGATGAAAAGCCACTTTTGGAAGAACCAAAACCTGCCGAAACAGATAAATTACCGAAAAGCAGTGTACAACAACCAAAGGAGGAGCCGAAATCATCTCCGCAAGAAACTGTGCCAGCTCAGAAGGTTCAGAATGAAACCAAAAAGAAAGGAAAAGATTTGAAATCAAGTCTGGACAGTAAGGATTCAGAAGATGCAGATGAGTATGAATTTGAAAGGCCAAAAGAGGTGGTTCCCAAGGAGCCTCCAGTTGATCCAGAAAAGCTGAAAGAGATGAAAAGAGAAGAGGAAATCGCGAAAGCAAAGCAGGCCTTGGAAAGGAAGAAAAAACAAGCAGAGAAAGCCGCAGCCAAAGCAGCTATAAGAGCACAGAAGGAAGCTGAGAAGAAGCTTAAGAAGGAACAAGAGAAGAAAGCAAAGAAGGTGGCTGGTGGCTCTGGAGCTGTTCCAAATCCCGAGGAACCAGCAAATGAAGTTGAGGAGGTTACAGAGCAGAAGACCAATGATACTGTGGAGGCCTCAGTTCCGGCGAAGGAGAAGGTGCAAAAGGAGAGCAGTGCTAGGTCCAGGAGTAGAGTGAAAGCATTGAAAACCCCCGAGTCAATTCCAAAAGCTATTCTCAAGAGGAGAAGGTCTAACAACTGGATATGGATTGCATCTTGTGCTTTGATAGTCCTGGCCTTGATGGTGCTTGGATTCATCCTTCTTTCTTGA 1869 0.4339 MAAEVVGFEMVEGPPETGAEGDKSVSQECENGKLEQDEGAAEPIKFESHEDESAKAEGNVVLDNNVPKEAAEEWPAPKQILSFYFVRFRPYDDPNIKAKLDKLDKEISQKNQARIQVTDALRAKRSERAELISQIKSLRDNNRQFQSIVDEKIKEIEPLQQALGKLRTTNSAGRGAGLCSSEEELNSIINSLQYRIQHESIPLAEEKQILREIKQLEGTREKVIANAAMRAKVQDSMGQKEAIQDQVKLIGGDLDGVKKERQAIRSKIKQLDDGIQALDKDIMSLQDELAAITEKREKAYESIQQLRKQRDQGNSNFYQSRTILNKARELAAKKDINALEELSQTEVEKAMSFWNSDKSFRDDYEKRLLPSLDMRQLSRDGRMRNPDEKPLLEEPKPAETDKLPKSSVQQPKEEPKSSPQETVPAQKVQNETKKKGKDLKSSLDSKDSEDADEYEFERPKEVVPKEPPVDPEKLKEMKREEEIAKAKQALERKKKQAEKAAAKAAIRAQKEAEKKLKKEQEKKAKKVAGGSGAVPNPEEPANEVEEVTEQKTNDTVEASVPAKEKVQKESSARSRSRVKALKTPESIPKAILKRRRSNNWIWIASCALIVLALMVLGFILLS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01427 622 MobiDBLite consensus disorder prediction 375 409 - -
Cca04g01427 622 MobiDBLite consensus disorder prediction 26 57 - -
Cca04g01427 622 Coils Coil 268 309 - -
Cca04g01427 622 MobiDBLite consensus disorder prediction 375 581 - -
Cca04g01427 622 PANTHER PROTON PUMP-INTERACTOR 1 10 517 IPR029669 GO:0005783|GO:0005886|GO:0010155
Cca04g01427 622 Coils Coil 476 523 - -
Cca04g01427 622 MobiDBLite consensus disorder prediction 410 427 - -
Cca04g01427 622 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 10 517 - -
Cca04g01427 622 MobiDBLite consensus disorder prediction 428 526 - -
Cca04g01427 622 MobiDBLite consensus disorder prediction 1 60 - -
Cca04g01427 622 Coils Coil 121 141 - -
Cca04g01427 622 MobiDBLite consensus disorder prediction 561 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01427 Cca-Chr4 18996320 19002255 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01427 - - gmx:100793963 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01427 04 18996320 19002255 Cca04g01427 04 18996320 19002255 ECH