Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01423 ATGGTTTCTTCTGTCTTTACCCTTATCTGTGTTCTTCATGCCTCAATAGCTCTTACTTGTGGAGCTTTGATGATATTTTACTCCAAAGAGATCTCTGTGCTTGGCCATGGACCAGAAACTGCAAGCAAGCTTAAAGGGACAACACCCCATGATCAGCTTTTGATTGAGACCTCTGACTCCTTCTCTGGCTTGTTGTTGTTCACAATAGGGTTATTTCTTTTGATGGTTGCCTTTGTTAAGGACAGAGAGTTTCAAAGTTTCTTTGCCAAAGGGTGTGTGATGCTCCACATTTCCATGGCAGTGTGGAGATTCTTCTTTGAGAGGAAGCTTGGAGATCTGGCACATGAATGGCCTAGGCATGCTGTTGGGGACATTGCACTGGCCATTTCATGGGTCTTCTTTCTTGTGTACACATGGAGAGAGAAATATGATTACAAAACACAGGCAGCCTCGTATACCATACCTCAGACTCGGAGGAGACTAAGATACAAAGACAATGAGTGGTTGTCAACTGCAAAATGCTTCCCCTGCCTTGACCTTACAAGCATCACAAAAAAACGAAGGTTCAGTGACTGTGGAAACCGCATGGTGAAGCAGCTTGTGCAAAATGGATTGAGGCTCATCGACTCTGCCTCCGTGCTGAGGGATTCAATGTTTGAGGTTGATAGTAAGGAAAGGAGAAAAAGACATTAG 693 0.4416 MVSSVFTLICVLHASIALTCGALMIFYSKEISVLGHGPETASKLKGTTPHDQLLIETSDSFSGLLLFTIGLFLLMVAFVKDREFQSFFAKGCVMLHISMAVWRFFFERKLGDLAHEWPRHAVGDIALAISWVFFLVYTWREKYDYKTQAASYTIPQTRRRLRYKDNEWLSTAKCFPCLDLTSITKKRRFSDCGNRMVKQLVQNGLRLIDSASVLRDSMFEVDSKERRKRH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01423 230 PANTHER PROTEIN, PUTATIVE-RELATED 1 144 - -
Cca04g01423 230 PANTHER TRANSMEMBRANE PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01423 Cca-Chr4 18857161 18862909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01423 - - gmx:100500415 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01423 04 18857161 18862909 Cca04g01423 04 18857161 18862909 ECH