Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01421 ATGGCACTGTCATTTTTACTCATGCCATTGTTTCTCTTCACTATTGTGTCCCCAAACACCTTCTCATCCTTTGCTTCTCCTGTCTCTTACATGGATCATTGTGGTTCTATGGTTCCAATTCCAAACTCAATCCTCAACGACTCAAAGTTCAAAGTCTTCCCACACGGTCAACGCCAACATGGTTACTATCTTGGTGGTGGCACTGTCTACCCCCGGGGAGGGGGTCAGAAAGATGTTACCCTTCAAATCAAGAATGTGTTCGAAACTGATGTTGCTGGCATCCTCAACGTAGGAGCAAGGTTAGAAATGCGAAGTGCCACTTGGTATTACCGTGTCCATGATGGAAACTTCTCAGATACCAACATGTGGAACTACGATCAGTTTCCAACTTTTATAACGTTTTTGCTTGAAGGGTTCTGGTCAGAATATTCAGGGAAGCTTTGTATGGTTGGAACAGAAACTGATGATGGCATGCGGCAACCCTTGGAAGTTGTTCTCAGGCTTTACAATGTTGTCAATTCGAGGAATACTATTTCTACTTTGATTACTGGAAGCTTGGAAAGCGTGAGTTCTGAGCACGAGGTGAGTTATTTTGAATCCCTTTCGCTGTTTATTTTTCCAAAAATGGATTATGAATATAGTTTGGATACTAAAGAAACAAGAAATGAGTATGCTGATGAAGGTGAAGTAGTGGTGGGCTTACCCGTTAATCCAGTTAGATTTTGCTCAAAGCTTTTTTCAATGATTAATGGTAATTATGATTTGCAATATCAACGTGAGTGCAAATCTGCAAAAAATTGCATTCCTGTTGAAGTTGATGACAACCAATTGCCTTACATTGTGTCTTTGGAAGTATTGGTTTGTTCAAATGTTAAGCAAAGGCTGAAACTATTGATTGGTTTTGGCAATATTTATTTTGGTTCCATTGGGTCTTTCAATCCTAATTCTACATTAGTTGGAGAAGGGTGGTGGGATGAGGAAAAGAACCAATTGTGCATAGTTGGTTGCCATTTCTTGGGAAATGGAGGATCAATGGCCAGTGTCCATGTGGGTGATTGCTCAACAAGAATGAGTATGAGGTTTCCAAAAATTTGGTCAATGAATGATGCAAGTAGCATTGTGGGCCAAATTTGGAGCAACAAAGCTGTGGGGGATTCAGGTTATTTCAAGAGAATGATTTTAAGAAGTCATCAAGACAAAAGGGATAGAATTGCTGGTATAAAATATGAGTATAGCCAACTTGACAAAGCCAGAAAAATGTGCCCAAGACAAGAACCTCTCAAGAACAAGGGAATAAGGTATCCGGATGTTTATTCTTCTGACATGAAATTTGACATGGGAGTTGAATACTATGACAAAATAGTTGCTTGGGGTTCTTCTATAACATTTGTTATTAATGATCAGATCCAAAAGTTGAACTTAGATGAAAACTTTGTTCCCAAGTCCAGCCACACACAACCATTTACTTCAGCAGACTCCAGCAGTGCTGGCCTGTACAATATTAGCTACCAAATTATCTTCGGTCTAGAACCTGATGCAAAATTAGGTGAAGAGAAGTCATTGTTAAATGCAACTACGAACGCAACTGAGACAGAAATTAATGTTTCTGCTGAGGGAATTTATGATGTTGAATCTGGAAGTTTGTGTATGGTAGGTTGCAGGAATCTTGGATCACCAAACCAAATACCAACAACAGATTCTGTGGATTGTGAAATTATAGTCAAGTTTCAGTTCCAACAGCCAAAGGAAAAGAACAATGGAGCTTATGTTAAGGGAAGTATTGAAAGCATGCGCAAAGATTCAGACCCTCTTTACTTCATTCCCTTGAACCTGTCTTCAGTTGCGTATTACACAATAGAACCGAAACAAATCTTAAGAAAAGTAGATGTGGAGATCATAATGATTCTGGTGAGTACCACGCTAGCATGTGCTTTTGTGGGTTTGCAACTCTACCATGTGAAAAGAAATCCTGACATGGTTCCCTTAATGTCCTTTATCATGCTATTAATTCTCACTTTGGGAAATATGACATCTCTTGTTCTCAACTTTCATTCGCTTCTTGCACAAAATCATGCAAAGATAAGCATTTTGCTTGAAAATCAATGGCTTGGGCTAAATGAAATTTCTGTAAGGCTAATAGCAATGGCAACTTTCCTTTTGCAACTCCGACTCCTGAAGCTAACATGGTCAGCAAGAAAGGGTGATAGAACTCAGAATGGTCTCTGGATTGCTGAGAAGAAGGTTCTGTATGTGATCTTTCCTATATATGTTGCTGGATTCTTAAATGCATTGCTTGTGTTCCGAAACAATGCTTTCCATGACCATGCAGTGCCTTCATATGGCCTTTCAAACTATCAGAAACATTTGTTGTGGATGAATTTGAAATTTTATTCAGGTTTGGTACTAGATGGCTTTCTCTTACCTCAAATTTTGCTTAATATGTTCTGGAATTCCAAGGGCGATGCTCTTTCTCGTTTATTTTTCTTTGGAACAAGCATGGTGAGACTTCTTCCCCGGGCATATGATGATCTCTTTGAGGCTCTTATATATGTTATTGGTTCAACCTATCACACTGACGAGGAGCGGGGTGAATATTATTCCCGTGCTTCGGATATGATTGTTCCTTTGGTAGTGTTGGTGTTTGCTATAATTATCTATTTGCAACAAAAGTTTGGTGGTCGCAGCATTCTTCTTTGGAGAAACACAGATAAAGAGTATGAAAAGGTGTCAGTGGTGGCTGAAGCATAG 2748 0.393 MALSFLLMPLFLFTIVSPNTFSSFASPVSYMDHCGSMVPIPNSILNDSKFKVFPHGQRQHGYYLGGGTVYPRGGGQKDVTLQIKNVFETDVAGILNVGARLEMRSATWYYRVHDGNFSDTNMWNYDQFPTFITFLLEGFWSEYSGKLCMVGTETDDGMRQPLEVVLRLYNVVNSRNTISTLITGSLESVSSEHEVSYFESLSLFIFPKMDYEYSLDTKETRNEYADEGEVVVGLPVNPVRFCSKLFSMINGNYDLQYQRECKSAKNCIPVEVDDNQLPYIVSLEVLVCSNVKQRLKLLIGFGNIYFGSIGSFNPNSTLVGEGWWDEEKNQLCIVGCHFLGNGGSMASVHVGDCSTRMSMRFPKIWSMNDASSIVGQIWSNKAVGDSGYFKRMILRSHQDKRDRIAGIKYEYSQLDKARKMCPRQEPLKNKGIRYPDVYSSDMKFDMGVEYYDKIVAWGSSITFVINDQIQKLNLDENFVPKSSHTQPFTSADSSSAGLYNISYQIIFGLEPDAKLGEEKSLLNATTNATETEINVSAEGIYDVESGSLCMVGCRNLGSPNQIPTTDSVDCEIIVKFQFQQPKEKNNGAYVKGSIESMRKDSDPLYFIPLNLSSVAYYTIEPKQILRKVDVEIIMILVSTTLACAFVGLQLYHVKRNPDMVPLMSFIMLLILTLGNMTSLVLNFHSLLAQNHAKISILLENQWLGLNEISVRLIAMATFLLQLRLLKLTWSARKGDRTQNGLWIAEKKVLYVIFPIYVAGFLNALLVFRNNAFHDHAVPSYGLSNYQKHLLWMNLKFYSGLVLDGFLLPQILLNMFWNSKGDALSRLFFFGTSMVRLLPRAYDDLFEALIYVIGSTYHTDEERGEYYSRASDMIVPLVVLVFAIIIYLQQKFGGRSILLWRNTDKEYEKVSVVAEA 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01421 915 Pfam Protein of unknown function (DUF2921) 32 897 IPR021319 -
Cca04g01421 915 PANTHER DUF2921 FAMILY PROTEIN 8 914 - -
Cca04g01421 915 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 8 914 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01421 Cca-Chr4 18767585 18770332 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01421 - - ccaj:109818444 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01421 04 18767585 18770332 Cca04g01421 04 18767585 18770332 ECH