Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01420 ATGGATTCTCTAGCATTGTCGTTTCTTCTAATTCCACTGTTTCTTTTCACCACCCTCAACACTTTCTCATCTTATGCTTCTCAACTCAGTTACACAGATCACTGTGCTTCTATGGTTCCAAACTCAACCCCCAATGAGTCCAAGTTCAAAGACTTCCCTCATGGTCCATTCCAAGTTGGTTACTACGTTGGTGGTGACACAATTGTTGGTGCTGACACCGTCCAGAAACTGAGGCAGAAACAAGTTACCCTTCAAATCAAGAGTGTGTATGAAACTGATGGCATTGGCATACACAAAGTTGGAGCTACCTTTATGGTAAGAAGTGCCAGTTCCTATTACCGTGTGGGAAACTCCACACGTGGCAAAAGATTGAAGAACCGTAAGCGTTTTCCAAGTTCAATCACGTTTAGGCTTGATGGGTTCTGGTCAGAATCTTCAGGGAAGCTTTGCATGGTTGGAACGGGAACTGGCTACAGCATGCCACGTTTGGAGGTTGTTTTCAAGCTTTACAATGTTGTCTATTCGAGGAATACTATTTCTACCTTGGTTAGTGGAAGCTTGGAGAGCTTGAGTCCTAAGCATGAGGTGAGTTATTTTGAACCCATTTCTGTGTTTATTTTTCCTAGAATGGATTATGAGTATAGCTTGGATACTAAAGAAGCAAAAAATGAGTATTCTGATGAAGGGGAAGTAGTGCCAGGTTTATCCATTAATCCAGTTAGTTTTTGTGCAAACATTTTTCCAATGATTAATGGTAAATATGATTTGCAATACCAAAGTGATTGCAATTCTGCAAAGAATTGTAGTCCTATTGGGGGGGATGCAAATCAATTGCCTTATATTGTGTCTTTGAAAGAATTGGTTTGTTCAGATGTTACACAAAGGGTGAGAGTATTGATTGGGTTTGGAAATAGTGGTGCTAGATGGTCTTTCAATCCTAATGCTACCTTAGTTGGAGAAGGGTGGTGGGATGAGGAAAATAACCAATTGTATATAGTTGGTTGCCATTTCTTGGGAATGCAAGAATCAATGGCTAGTGTTCGTGTGGGTGATTGCTCAACAAGAATGAGCTTGAGGTTTCCAAAGATTTGGTCAATCAATGATGCAAGTAGCATTGAGGGCCAAATTTGGAGCAACAAAACTGTGGGGGATTCAGGTTTTTTCAAGAGGATGATTTTAAGAAATTTTCAATACCATAGAGTTGAAATTTCTGGCATAAAGTATGAGTATAGCCAACTTGACAAAGTGAGAAAGATGTGCCCAAAACAAGAACCTCTGAAGAACAAGGGAATGAGGTATCCAGATGTTTATTCTTCTGACATGAGATTTGACATGTCAGTTAGAAACTCTAAGATTGAAGTTGCATGGGGTTATTCAGTTCCATTAGTTGTTAGCGATCAGATCCAACAATGGAACTTAGCTGAAACCTTACCTTCTAACTCTAGCTACACACAACAATTAATTTATGCAAACACTAGCACCATTGGCTTGTACAATGTTAGCTACAAAATCAGCTTCAATCTACTACCTAATGCCAAGTTAGGTGAAGAGAAGTCTATGCTAAACACAACAACAAATGTAAATGAGTCAGTGAGTGTTTCAGCTGAGGGAATTTATGATGCTAAAGCTGGAAACTTATGTATGGTAGGTTGCAGAAACCTTGGCACAAAGAACCAAATACCATCAACAAATTCTCTGGATTGTGAGGTTATAGTCATGTTTCAGTTTCCACCACTTGATGCAAAGAACAAAGGAGGTTACATCAAAGGAAGAATTGCAAGCACGCGCAAAAATTCAGATCCTCTTTACTTCAAACAGTTGGATGTGATTTCAGCTGCATTTTACACAGAAGAAGCATCACAAATCTTTAAAAAAGTAGACATGGAGGTCATAATGATTCTGGTTTGCACCACACTAGCATGTGTCTTTGTTGGTTTGCAACTCTACCATGTGAAAAGAAATCCTGATATGCTTCCCTTGATCTCCTTTTTCATGTTATTGATTCTCACTTTGGGAAATATGGTACCTCTTGTTCTGAACTTTGAAGCCCTTTTTGCACAAAATCGTGATAAGAAAAACATTCTGCTTGGAAATGAATGGCTTGAAGTGAATGAAATTGCTGTGAGGCTAATTGTGATGGTGGCTTTCTTGTTGCAACTTCGTCTCTTGCAGCTAACATGGTCAGCAAGAAAGGCTGACACAAAACAAAAGGGTCTTTGGATTGCTGAGAAGAAGGTTTTGTATGTGATTTTTCCCTTGTATGCAGCAGGATTCTTGGTTTCATTTCTTGTACACCAAAACAACACCGTGCATGGTGATGTGATGTCTTCATCTAACTTTTCACAACAACACTCATTTTGGGAGGACTTGAAATCTTATTCAGGTTTGGTACTAGATGGCTTTCTCTTGCCGCAAATTTTGCTTAATTTGTTGTGGAATTCCAAGGGCAATGCTCTTTCTTTTTCATTCTACTTTGGAATCAGTTTGGTTAGATTAATTCCCCATGCATATGATCTCTTTGAGGCTCTTGTTTATGTTGATGGTTCATCATTATATGAGGATGAAATTGCAGACTATTATTCCACTGCTTGGGATATAATCATTCCATTGCTAAGCTTAATGTTTGCTGCAATTGTCCATTTGCAACAACGGTTTGGTGGTAGCAGCATTCTTTGTTGGAGAATCAAAGGTATAGAAAAATATGAAAAGTTGCCTGTGGTGACTGAAGCACAGTTCCAAAGAAATGTAGCAGACCACATAGTGATGCTGAGAAAACAGAATGACTCACCCTTTAGCATGTCTTTTTCCACTTCTATGAGCAACAAAATTTGTAACATTTCGGGTTTATATAAATGA 2856 0.3883 MDSLALSFLLIPLFLFTTLNTFSSYASQLSYTDHCASMVPNSTPNESKFKDFPHGPFQVGYYVGGDTIVGADTVQKLRQKQVTLQIKSVYETDGIGIHKVGATFMVRSASSYYRVGNSTRGKRLKNRKRFPSSITFRLDGFWSESSGKLCMVGTGTGYSMPRLEVVFKLYNVVYSRNTISTLVSGSLESLSPKHEVSYFEPISVFIFPRMDYEYSLDTKEAKNEYSDEGEVVPGLSINPVSFCANIFPMINGKYDLQYQSDCNSAKNCSPIGGDANQLPYIVSLKELVCSDVTQRVRVLIGFGNSGARWSFNPNATLVGEGWWDEENNQLYIVGCHFLGMQESMASVRVGDCSTRMSLRFPKIWSINDASSIEGQIWSNKTVGDSGFFKRMILRNFQYHRVEISGIKYEYSQLDKVRKMCPKQEPLKNKGMRYPDVYSSDMRFDMSVRNSKIEVAWGYSVPLVVSDQIQQWNLAETLPSNSSYTQQLIYANTSTIGLYNVSYKISFNLLPNAKLGEEKSMLNTTTNVNESVSVSAEGIYDAKAGNLCMVGCRNLGTKNQIPSTNSLDCEVIVMFQFPPLDAKNKGGYIKGRIASTRKNSDPLYFKQLDVISAAFYTEEASQIFKKVDMEVIMILVCTTLACVFVGLQLYHVKRNPDMLPLISFFMLLILTLGNMVPLVLNFEALFAQNRDKKNILLGNEWLEVNEIAVRLIVMVAFLLQLRLLQLTWSARKADTKQKGLWIAEKKVLYVIFPLYAAGFLVSFLVHQNNTVHGDVMSSSNFSQQHSFWEDLKSYSGLVLDGFLLPQILLNLLWNSKGNALSFSFYFGISLVRLIPHAYDLFEALVYVDGSSLYEDEIADYYSTAWDIIIPLLSLMFAAIVHLQQRFGGSSILCWRIKGIEKYEKLPVVTEAQFQRNVADHIVMLRKQNDSPFSMSFSTSMSNKICNISGLYK 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01420 951 Pfam Protein of unknown function (DUF2921) 33 890 IPR021319 -
Cca04g01420 951 PANTHER DUF2921 FAMILY PROTEIN 7 909 - -
Cca04g01420 951 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 7 909 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01420 Cca-Chr4 18761489 18764344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01420 - - ccaj:109818444 1866.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01420 04 18761489 18764344 Cca04g01420 04 18761489 18764344 ECH