Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01388 ATGGAGGAGGACAAGTACGCCAAGGAATTGGAGGTGGCCGTTAGGGTGGTCCACGTGGCGTGTGCTCTCTGCGGGAGGGTGCAGGAGAGGCTCCTCGCCACCAGCAATGATCACGTTCTGTCAAAGGATGATGATTCTCCTGTTACTGTTGCAGACTTCAGTGTTCAAGCAATTATTAGTTGGTTACTCTCTGAAATTTTTGGGGTTCAAAACGTGTCAATCGTTGCTGAAGAAGACATAGAAACAATTTCCAATGACGGATCAGCAGGCCTACTGGAGGCTGTTGTTAATACTGTCAACGAGTCTTTAGCTTCAGCATCCAAGTATGGTCTTCAAAGTCCGGAGACAACTCTAGGGACATCTGAAGTTCTTGAGGCCATTGCCCGTTGCAACTCGACTGGAGGCCCTAGGGGAAGATATTGGGTACTGGACCCTGTTGATGGCACATTAGGATTTGTACGTGGGGATCAGTATGCTGTTGCTCTAGCTCTGATTGAGGATGGAAAAGTTGTTCTTGGAGTTCTGGGGTGTCCTAATTACCCAGTAAAGACAGAATGGCTTAATTATCATTACCAGGATCATCAAACAATGCCACAATCATCTCTAGTAACTCCTGATGCTGGGGGAAAAGGATGTGTATTGTATGCAAGAAGAGGCAGTGGTGAGGCATGGTTGCAGTCATTAGTTGATGGAGAGAAAATGCTTGAATGGCCAAATCGTGCTAGACTTATTCGTGTTTCTTCTATTGATGATCCGGCATTGGCAACTCTCTGTGAACCAGTGGAAAGGGCTAACTCAAACCATTCATTCACAGCTGGACTTGCTCACAGTGTTGGACTTAGAAAACAGCCATTGCGCGTGCACAGCATGGTGAAATATGCAGCAATCGCCCGTGGCGATGCTGAGATATTCATGAAATTTGCCAAGTGTGGTTACAAGGAGAAGATATGGGACCATGCTGCTGGTGTGGTGATTGTTGAAGAGGCTGGTGGTGTGGTGACTGATGCTGGGGGACGCCCCCTGGACTTTTCAAAGGGAATGTATTTGGAAGGCCTTGACAGAGGCATAATTGCATGCTCTGGTGTCACATTGCATGAAAAATTCATTGCTGCTGTTTATGCTAGCTGGGACTCCTCAAATTTATGA 1146 0.4686 MEEDKYAKELEVAVRVVHVACALCGRVQERLLATSNDHVLSKDDDSPVTVADFSVQAIISWLLSEIFGVQNVSIVAEEDIETISNDGSAGLLEAVVNTVNESLASASKYGLQSPETTLGTSEVLEAIARCNSTGGPRGRYWVLDPVDGTLGFVRGDQYAVALALIEDGKVVLGVLGCPNYPVKTEWLNYHYQDHQTMPQSSLVTPDAGGKGCVLYARRGSGEAWLQSLVDGEKMLEWPNRARLIRVSSIDDPALATLCEPVERANSNHSFTAGLAHSVGLRKQPLRVHSMVKYAAIARGDAEIFMKFAKCGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGMYLEGLDRGIIACSGVTLHEKFIAAVYASWDSSNL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01388 381 Pfam Inositol monophosphatase family 44 376 IPR000760 GO:0046855
Cca04g01388 381 ProSitePatterns Inositol monophosphatase family signature 1. 141 154 IPR020583 -
Cca04g01388 381 CDD PAP_phosphatase 9 374 - -
Cca04g01388 381 PANTHER PHOSPHATASE 1 381 - -
Cca04g01388 381 ProSitePatterns Inositol monophosphatase family signature 2. 317 331 IPR020550 GO:0046854
Cca04g01388 381 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 1 381 - -
Cca04g01388 381 Gene3D - 245 375 - -
Cca04g01388 381 Gene3D - 4 235 - -
Cca04g01388 381 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 6 380 IPR006239 GO:0006790|GO:0008441
Cca04g01388 381 SUPERFAMILY Carbohydrate phosphatase 6 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01388 Cca-Chr4 18120122 18126402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01388 K01082 - gmx:100806320 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01388 04 18120122 18126402 Cca04g01388 04 18120122 18126402 ECH