Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01385 ATGGGTATCTCAAGTAGGAATGGCTTAATGTATGTGCTGCTTTTGTTTGCATTCTGTGAAATGCAAATCATTGCAGGAAAAAACACTCTGTCATGCCCCTTCCGCAGCAGCCCATGCTTTGGGAAGAAAGTGCCATGCCCTTCTGAGTGCCCTCTTAAATCCCCATCTGACCCAAAAGCCAAAGTCTGCTACCTTGACTGTGACAATCCCACATGCGAAACTCGGTGCAAAACTCGCAAAGCAAATTGCAATGGACGTGGATCAGCATGCCTGGACCCACGTTTCGTGGGAGCAGACGGAACAGTGTTCTACTTCCACGGAAGAAGAAACGAGCACTTCGCCTTGGTATCAGACACCCACTTCCAGATAAACGCACGTTTCATCGGGCTGAGGCCCGCGACAAGAGCCCGCGACTACACGTGGATCCAGGCCCTCGGAATCATCCTCCAGGGCCCCCACACCTTCACCGTCGAGGCCACGTCATCGCCCACGTGGGACAACGACGTCGACCACCTCAAATTCTCCCACGACGGCAAGCCCCTCGCCATCGCCCAGGGCTACCTCTCCACGTGGCAAAGCGACCACGTCAGGGTAGAGAGAGCTTCCAGCGTCAACAGTGTCACCATCACGCTGCATGGCGTTGCTGAGATATCGGTGAACGTTGTGCCCGTCACTAGGGAAGATAGTAGGGTCCACAACTACCAGATTCCTCACGATGATTGCTTTGCACACTTGGAGGTGCAGTTTAAGTTCCATGGTTTGTCTCAGAAAGTTGAAGGGGTTCTTGGGAGGACTTATCAGCCGGACTTTGAGAACCCTGCGGCGAAGTTGGGGGTGGCCATGCCGGTGGTCGGAGGGGAAGACAGGTACAGGACCACGTCGCTTGTTGCTGCCCATTGTAGGGTTTGTTTGTTTGGTGCAGAAGAAACACTCCGAGCAATAATATTACAGGGAATATAA 960 0.5323 MGISSRNGLMYVLLLFAFCEMQIIAGKNTLSCPFRSSPCFGKKVPCPSECPLKSPSDPKAKVCYLDCDNPTCETRCKTRKANCNGRGSACLDPRFVGADGTVFYFHGRRNEHFALVSDTHFQINARFIGLRPATRARDYTWIQALGIILQGPHTFTVEATSSPTWDNDVDHLKFSHDGKPLAIAQGYLSTWQSDHVRVERASSVNSVTITLHGVAEISVNVVPVTREDSRVHNYQIPHDDCFAHLEVQFKFHGLSQKVEGVLGRTYQPDFENPAAKLGVAMPVVGGEDRYRTTSLVAAHCRVCLFGAEETLRAIILQGI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01385 319 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 4 310 - -
Cca04g01385 319 Pfam Root cap 248 305 IPR009646 -
Cca04g01385 319 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 4 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01385 Cca-Chr4 18071071 18072799 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01385 - - ccaj:109799262 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01385 04 18071071 18072799 Cca04g01385 04 18071071 18072799 ECH