Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01378 ATGAAGTGTTGCAGTGTAAGCAGCGCAGTTTCTGCTTATCCTATTGGAACTTCCCCTCCCATGGCTACTTCACCTCTCTCCGTTCCCCTCAATGTTATCAACACTCATCGTTCCATTGCCAACCCCTTCGTCCCAGAGGTTGTAAAAGCAGTGGATGCTTTGCATTTTGAATTCAGGGCTGTGGATAATTTGGTTGCATGCAATACCACCCGGGTCCTTAAAGCTTTCCAGAATGCTCGAGTTGGATCCCATCACTTTGGCGGTTGCACTGGTTATGGTCATGATGAAGCTGGGGGTCGTGGGGCTCTTGATCAGGCTTTTGCAGAAATTGTTGGGGCTGAGTCAGCTATCGTTCGTCCACAGTTCTTTTCAGGTACTCATGCTATCACATGTGCTTTATTTGCTCTCCTGAGGCCAGGGGATGAGCTTTTGGCAGTTGCTGGTGCTCCCTATGACACGCTAGAAGAAGTAATTGGGAAAAGGGACTCTGGTGGGCTGGGTTCCCTCCAAGATTTTGGGGTGAAGTACCGAGAAGTTCCACTTGCTGAGGATGGTGGACTCGACTGGAATGCACTGATGAGTGCTGTCAAACCAAAAACAAAATGTGCGCTCATACAGCGGTCATGTGGTTACTCGTGGCGCCGCAGTTTGAGTGTTAATGACATAGGAAGGGCAATAAAAATAATCAAGATGCAAAATCCCAGCTGCTCAGTCATGGTGGACAATTGCTATGGTGAATTTGTTGAGAACATTGAACCTCCCATGGTGGGTGCAGATTTGATTGCAGGCAGCTTGATCAAGAATCCTGGTGGAACGATTGCACCATGTGGTGGATACGTTGCCGGGAAGCAAAAATGGGTTGAAGCAGCTGCAGCCCGTCTTTCTGCTCCAGGACTTGGTGTGGATTGTGGTTCTACCCCTGGTGATATCATGCGAGCCTTTTTCCAGGGATTATTTCTTTCACCTCAAATGGTTGGGGAAGCTGTCAAGGGCTCCTTCCTGATTGCTGAAGTTTTGGCATCTAAAGGCTATAAAGTGCAGCCACTCCCCCGTGTCCCCCGTTCTGATACGGTTCAGGCTGTCCAGCTTGGAAGTCGCGACCGTCTCCTAGCTTTCTGCGAGGCTGTTCAGAGAAGCTCTCCAGTAGGCTCATATACCAAACCAATTGCGGGTACGACTCCTGGATATGCATCAGAGGTGATTTTTGCTGATGGAACCTTCATAGATGGGAGTACTAGTGAGCTTTCATGTGATGGACCTCTTAGAGAGCCATTTGCTGTATTTTGCCAGGGTGGCACCCATTGGACTCAATGGGGACTAGTCCTAGGAGAAGTTTTGAAATCTTTATGA 1350 0.4874 MKCCSVSSAVSAYPIGTSPPMATSPLSVPLNVINTHRSIANPFVPEVVKAVDALHFEFRAVDNLVACNTTRVLKAFQNARVGSHHFGGCTGYGHDEAGGRGALDQAFAEIVGAESAIVRPQFFSGTHAITCALFALLRPGDELLAVAGAPYDTLEEVIGKRDSGGLGSLQDFGVKYREVPLAEDGGLDWNALMSAVKPKTKCALIQRSCGYSWRRSLSVNDIGRAIKIIKMQNPSCSVMVDNCYGEFVENIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKQKWVEAAAARLSAPGLGVDCGSTPGDIMRAFFQGLFLSPQMVGEAVKGSFLIAEVLASKGYKVQPLPRVPRSDTVQAVQLGSRDRLLAFCEAVQRSSPVGSYTKPIAGTTPGYASEVIFADGTFIDGSTSELSCDGPLREPFAVFCQGGTHWTQWGLVLGEVLKSL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01378 449 Gene3D - 95 303 IPR015421 GO:0003824
Cca04g01378 449 Gene3D - 304 449 - -
Cca04g01378 449 PANTHER - 34 449 IPR009651 -
Cca04g01378 449 SUPERFAMILY PLP-dependent transferases 52 420 IPR015424 -
Cca04g01378 449 Pfam Methionine gamma-lyase 49 447 IPR009651 -
Cca04g01378 449 Gene3D - 44 94 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01378 - - gmx:100809166 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01378 04 17974072 17978926 Cca04g01378 04 17974072 17978926 ECH