Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01376 ATGCATACTGCAGAGATTGTTTTGTATGGATCAACTTTATGTGTCATGATTAGTGTGCATTTTGCTATGAAGCTACTCTCAGAGCATGTTTCGAACTGGAAGAAACCAAAGGAGCAGAAGGCCATAGTAGTTATAATTCTTATGGCCCCATTGTATGCTGTGGACTCCTATGTTGGTTTGATAAATTTCTTTGGAAGTGAAGTTTTTTTCACATTCTTGGACTCAATTAAGGAGTGTTACGAGGCTTTGGTGATTGCTAAGTTCTTGAGTTTGATGTACAGTTATTTGGACATTTCCTTGAGTAAGAACATAGTTCCAGATGGGATCAAGGGAAGAGAGATTCACCATTCATTTCCAATGACTCTTTTTCAGCCTCATACTACTCGTCTGGACCATCACACACTGAAGCTTCTCAAAAACTGGACTTGGCAATTTGTTGTGATACGTCCAGTGTGCTCAATCTTGATGATAACTCTACAGTATTTTGAGATTTATCCCAGTTGGGTCAGCTGGACAAATACAATCATTCTAAACATTTCAGTGTCACTGGCACTATATTCTCTTGTTGTTTTCTACCATGTGTTTGCTAAAGAGCTGGAACCACACCAGCCTCTTGCCAAGTTTTTATGTATAAAAGGGATTGTCTTTTTCTGCTTTTGGCAGGGAATTGTTCTTGAACTCCTGGCAGCATTGGGAATAATCCGATCCCGTCATTCTTGGCTAACCGTGGAACGTATTGAGGAAGGCTACCAAAACATTTTGGTTTGTCTTGAAATGGTTTTCTTCTCTATATATCAGCAATATGCATATAGTGCTGCACCATACAAGGGTAATAACAAAAGTAGTGCACCTTCAGATAAGAAAACAAAGTGA 873 0.3906 MHTAEIVLYGSTLCVMISVHFAMKLLSEHVSNWKKPKEQKAIVVIILMAPLYAVDSYVGLINFFGSEVFFTFLDSIKECYEALVIAKFLSLMYSYLDISLSKNIVPDGIKGREIHHSFPMTLFQPHTTRLDHHTLKLLKNWTWQFVVIRPVCSILMITLQYFEIYPSWVSWTNTIILNISVSLALYSLVVFYHVFAKELEPHQPLAKFLCIKGIVFFCFWQGIVLELLAALGIIRSRHSWLTVERIEEGYQNILVCLEMVFFSIYQQYAYSAAPYKGNNKSSAPSDKKTK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01376 290 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 1 288 IPR005178 -
Cca04g01376 290 PANTHER DUF300 FAMILY PROTEIN 1 288 - -
Cca04g01376 290 Pfam Organic solute transporter Ostalpha 10 275 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01376 Cca-Chr4 17948509 17953669 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01376 - - gmx:100813477 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01376 04 17948509 17953669 Cca04g01376 04 17948509 17953669 ECH