Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01368 ATGGGTGATGGTAGTTATGATAGAGCGTTGAGGGAGTTCTGTATTCCGGATTACATATTAGTGCCGGGATCTGAGGTAAGAAGTGCTTCGCATGTTCCTGCGTGTCCTGTGATTGTGTTCATAAACTCCAAAAGTGGTGGCCAGCTTGGAGGGGAGCTTCTTGTTTCCTATAGTACACTTCTCAACAAAAACCAGGTTTTTGAATTGGGGAAAAATGCTCCGGATAAGGTGCTGCAGAGGCTTTATGCTACTCTGGAAATGCTCAAGCACAACGGAGATAATTTTGCGGCTGAAATTCAGAATAGGCTGAGAATAATTGTTGCGGGTGGAGATGGTACTGCCAGCTGGCTTCTTGGAGTTGTATCTGACCTTAAATTACCTCAGCCGCCGCCAATTGCTACAGTGCCATTGGGGACTGGAAACAATCTTCCCTTTGCATTTGGATGGGGAAAGAAAAATCCAACCACGGATCTCCAATCAGTGGCGTCATTCCTAAATGATGTAAAAGCGGCAAAGGAAATGAAAATAGACAGTTGGCATATTATAATGAGAATGAAGGCTCCAAAAGAAGGTTCATGTGACCCTATTGCACCCCTTGAGCTGCCTCATGCCATGCATGCATTTCATCGTGTGTCTTCAACAGATAAACTAAACTTGGAAGGTTACCACACTTACCGTGGGGGATTTTGGAACTACTTTAGCATGGGAATGGATGCCCAAGTATCTTATGCATTTCATTCAGAGAGGAAGTCAAATCCGGAAAAGTTTAAAAATCAGTTATATAATCAGAGTGCCTATCTGAAGCTTGGATGTACACAAGGATGGTTCTTCTCTTCTCTGTTTCAATCTTCTTCACGGAATATTGCTCAGCTGGCAAAGGTTAAGATAATGAAAAAAGGTCATTGGGAAGATCTCCACATACCTCGCAGTATTCGGTCAATAGTTTGCCTTAACTTGCCCAGTTTTTCTGGTGGACTTAATCCTTGGGGAACGCCAAATAGGAAGAAATCAATTTATAGGGACCTGACTCTTCCCTATGTGGATGATGGCCTATTTGAGGTAGTTGGTTTTAGAGATGCTTGGCATGGTCTTGTTTTGCTTGCACCAAATGGACACGGGACTCGTTTGGCACAGGCAAACAGAATCCGTTTTGAGTTTCACAAGGGTGCAGCTGACTGCACATTCATGAGAATTGATGGAGAGCCATGGAAACAACCCCTCCCAAAAGATGATGACACAGTTGTTGTTGAGATATCACACCATGGTCAAGTTAGCATGCTTGCCACCCCATTGTGCCGTTCCAAAAGTATTCATGATCCCTCCTCACCTACCGTTGATCATGAAGAAGATGATAGCAGTGATGAAGAACCACCAGAAGATTCGGAAGAACGGCGCAAGTTTGGTGCAGCTGACACATTCAAATATCCTGATGGATCAATTGATATAGCTCATATAAGTTAG 1461 0.4367 MGDGSYDRALREFCIPDYILVPGSEVRSASHVPACPVIVFINSKSGGQLGGELLVSYSTLLNKNQVFELGKNAPDKVLQRLYATLEMLKHNGDNFAAEIQNRLRIIVAGGDGTASWLLGVVSDLKLPQPPPIATVPLGTGNNLPFAFGWGKKNPTTDLQSVASFLNDVKAAKEMKIDSWHIIMRMKAPKEGSCDPIAPLELPHAMHAFHRVSSTDKLNLEGYHTYRGGFWNYFSMGMDAQVSYAFHSERKSNPEKFKNQLYNQSAYLKLGCTQGWFFSSLFQSSSRNIAQLAKVKIMKKGHWEDLHIPRSIRSIVCLNLPSFSGGLNPWGTPNRKKSIYRDLTLPYVDDGLFEVVGFRDAWHGLVLLAPNGHGTRLAQANRIRFEFHKGAADCTFMRIDGEPWKQPLPKDDDTVVVEISHHGQVSMLATPLCRSKSIHDPSSPTVDHEEDDSSDEEPPEDSEERRKFGAADTFKYPDGSIDIAHIS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01368 486 Pfam Diacylglycerol kinase accessory domain 229 402 IPR000756 GO:0004143|GO:0007205
Cca04g01368 486 SMART dagk_c4b_2 231 402 IPR000756 GO:0004143|GO:0007205
Cca04g01368 486 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 35 421 IPR016064 -
Cca04g01368 486 SMART dagk_c4a_7 36 179 IPR001206 GO:0016301
Cca04g01368 486 PANTHER DIACYLGLYCEROL KINASE 7 478 IPR037607 GO:0004143|GO:0007165
Cca04g01368 486 PANTHER DIACYLGLYCEROL KINASE 7 478 - -
Cca04g01368 486 MobiDBLite consensus disorder prediction 435 486 - -
Cca04g01368 486 Gene3D - 36 179 IPR017438 -
Cca04g01368 486 Pfam Diacylglycerol kinase catalytic domain 36 164 IPR001206 GO:0016301
Cca04g01368 486 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 32 185 IPR001206 GO:0016301
Cca04g01368 486 Gene3D - 228 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01368 Cca-Chr4 17834654 17841879 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01368 10 477 Acyl Lipid Metabolism Gene Families AT2G20900 72.000 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01368 K00901 - gmx:100801004 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01368 04 17834654 17841879 Cca04g01368 04 17834654 17841879 ECH