Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01363 ATGGAACTAGACTACGGTTTTGACTTCGAGGATTGCTTCCCTTCCATGATTGCTCGGTTGGGTGCGGAAGGGTTCATTGGGGAGCTTTGCAACGGCTTTCGAATGCTCATGGATGTGAACATGGGGCTTATCACGTTCGAGAGCTTGAAGGTGAGCACTTACTTGCTTGGTTTGGAGGTGAGGGATGATGAGTTGCTTTGCATGTTGATGGAGGGTGATTTGGATGGTGATGGGGCTCTCAACGAGATGGAGTTTTGCATTCTCATGTTTAGGTTGAGTCCATGCTTGATGGACATGCAAGGGAGCTGA 309 0.4887 MELDYGFDFEDCFPSMIARLGAEGFIGELCNGFRMLMDVNMGLITFESLKVSTYLLGLEVRDDELLCMLMEGDLDGDGALNEMEFCILMFRLSPCLMDMQGS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01363 102 Gene3D - 7 102 - -
Cca04g01363 102 Pfam EF-hand domain pair 42 91 IPR002048 GO:0005509
Cca04g01363 102 PANTHER CALCIUM-BINDING PROTEIN KIC 4 100 IPR044205 GO:0005509
Cca04g01363 102 SUPERFAMILY EF-hand 24 96 IPR011992 -
Cca04g01363 102 PANTHER CALCIUM-BINDING PROTEIN PBP1-LIKE 4 100 - -
Cca04g01363 102 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Cca04g01363 102 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01363 Cca-Chr4 17752972 17754408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01363 8 98 EF-hand Containing Proteins AT4G27280 58.065 1.09e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01363 K24345 - gmx:100795879 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01363 04 17752972 17754408 Cca04g01363 04 17752972 17754408 ECH