Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01298 ATGGCAATCTTGATCACACTCTTTctctccctctctctactcctccacttctctctctcatcctcctcctcCATCCACGACCTCCTCAGGTCCAAGGGCCTCCCCCCTGGCCTCCTCCCCGAAGAGGTCAAGTCCTACACTTTCTCCCAAAATGGGCACTTGGAAGTGTTCCTAGAGGCACCTTGCTTGACCAAGTACGAGAACAGGGTCCTCTTCCAACAAGTTGTCACTGCCAACCTCACCTACGGTAGCCTCATAGGTGTCCAAGGTCTCCAACAAGAGGAGTTGTCCAAGGGCCTCCCCCCTGGCCTCCTCCCCGAAGAGGTCAAGTCCTACACTTTCTCCCAAAATGGGCACTTGGAAGTGTTCCTAGAGGCACCTTGCTTGACCAAGTACGAGAACAGGGTCCTCTTCCAACAAGTTGTCACTGCCAACCTCACCTACGGTAGCCTCATAGGTGTCCAAGGTCTCCAACAAGAGGAGTTGTTCGTTTGGCTACCTGTCAAGGACATAATCGTAAATGACCCTTCTTCGGGCTTGATTCTCTTTGACATTGGCCTTGCCTACAAACAACTCTCTCTCTCTCTCTTTGAAGATCCCCCTCACTGCAAGCCCCAAGGTGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTCGAGGCCCTGAGATGGAGCTTTGAATTTGGAAAATGA 693 0.4805 MAILITLFLSLSLLLHFSLSSSSSIHDLLRSKGLPPGLLPEEVKSYTFSQNGHLEVFLEAPCLTKYENRVLFQQVVTANLTYGSLIGVQGLQQEELSKGLPPGLLPEEVKSYTFSQNGHLEVFLEAPCLTKYENRVLFQQVVTANLTYGSLIGVQGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAYKQLSLSLFEDPPHCKPQGGLRNHVRKEKGFEALRWSFEFGK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01298 230 SUPERFAMILY At5g01610-like 4 94 IPR036758 -
Cca04g01298 230 PANTHER - 97 222 - -
Cca04g01298 230 PANTHER - 8 96 - -
Cca04g01298 230 Pfam Protein of unknown function, DUF538 26 96 IPR007493 -
Cca04g01298 230 Pfam Protein of unknown function, DUF538 98 198 IPR007493 -
Cca04g01298 230 Gene3D - 12 97 IPR036758 -
Cca04g01298 230 Gene3D - 98 203 IPR036758 -
Cca04g01298 230 PANTHER T31J12.3 PROTEIN-RELATED 8 96 IPR007493 -
Cca04g01298 230 PANTHER T31J12.3 PROTEIN-RELATED 97 222 IPR007493 -
Cca04g01298 230 SUPERFAMILY At5g01610-like 98 206 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01298 Cca-Chr4 16223398 16226477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01298 - - ccaj:109817891 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01298 04 16223398 16226477 Cca04g01298 04 16223398 16226477 ECH