Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01296 ATGAAACGTGGGTACCAGGAATCTCCTTCAACCTCGTTTGGCCCACCTCAATCCAGAGCTAGGCATGATCCTCAAGGTGGTGCACACTTTCTTGAGGACGAAAGCACAAAGATTTTTGCTCGGAAAGTAGCTGATCATTACAGCGCTAGATCCAACCAGACTTTGGAAGAACGAGAGGCTAGTCCTATAATTCATTTGAAGAAACTCAATAACTGGATTAAGAGCGTCTTAATTCAGCTTTATGCTCGTCGAGGAGATGCAGTACTTGACCTCGCCTGTGGCAAGGGTGGTGATCTTATCAAATGGGACAAGGCCAAAGTTGGATATTATGTTGGTATTGACATAGCTGAAGGCTCGATCAAAGACTGCCGGACACGTTACAACGGTGATGCTGACCATCATCAGCGACGTAAAAAGTTCACATTTCCTGCTCGCCTTATTTGTGGTGATTGTTATGAGGTTCGCTTGGACAAAGTTCTTGCAGATGATGCTCCTTTTGATATTTGTAGTTGCCAGTTTGCATTGCATTATTCATGGTCTACAGAGGCCCGTGCCCGGCAAGCATTGGCTAATGTGTCAGGTTTACTTCGCCCAGGAGGCATTTTCATTGGAACTATGCCTGATGCCAATGTGATTATCAAGAAGCTTAGAGAAGCTGAAGGATTAACTTTTGGTAACAGTGTCTATTGGGTGCGTTTTGATGAAGAATTTTCTGAAAAGAAATTTAAATCTTCCAGCCCTTTTGGAATAAAGTACACGTTCCATTTGGAGGATGCTGTTGATTGTCCTGAATGGATTGTCCCCTTCCACGTATTCAAGGCATTAGCTGAAGAGTATGATTTTGAGCTTGTTTTTGCGAAGAACTCACATGAATTTGTGCACGAGTATATGAAGAAACCGGAATTTGTGGAGCTCATGCGAAGACTTGGTGCATTGGGAGATGGCAACCAAGATCAAAGTACACTCTCAGCTGATGAATGGGAGGCAGCATATTTATACATGTCATTTGTATTGAGAAAGCGTGGTCAACCTGACAAAACACAACCAAGTAACAGAAGGGATCGAGGGTCGATGCACATTTCAGAGGAAGACATCATGTACATTAGCACTGACTATTAA 1119 0.4325 MKRGYQESPSTSFGPPQSRARHDPQGGAHFLEDESTKIFARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQLYARRGDAVLDLACGKGGDLIKWDKAKVGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKFTFPARLICGDCYEVRLDKVLADDAPFDICSCQFALHYSWSTEARARQALANVSGLLRPGGIFIGTMPDANVIIKKLREAEGLTFGNSVYWVRFDEEFSEKKFKSSSPFGIKYTFHLEDAVDCPEWIVPFHVFKALAEEYDFELVFAKNSHEFVHEYMKKPEFVELMRRLGALGDGNQDQSTLSADEWEAAYLYMSFVLRKRGQPDKTQPSNRRDRGSMHISEEDIMYISTDY 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01296 372 CDD AdoMet_MTases 88 203 - -
Cca04g01296 372 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 22 347 IPR004971 -
Cca04g01296 372 MobiDBLite consensus disorder prediction 1 27 - -
Cca04g01296 372 PIRSF ABD1 5 343 IPR016899 GO:0004482|GO:0006370
Cca04g01296 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 340 IPR029063 -
Cca04g01296 372 Pfam mRNA capping enzyme 33 341 IPR004971 -
Cca04g01296 372 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 1 368 IPR039753 GO:0004482
Cca04g01296 372 MobiDBLite consensus disorder prediction 1 18 - -
Cca04g01296 372 Gene3D Vaccinia Virus protein VP39 59 342 IPR029063 -
Cca04g01296 372 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 1 368 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01296 K00565 - gmx:100779811 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01296 04 16198574 16205826 Cca04g01296 04 16198574 16205826 ECH