Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01281 ATGGAAGAAGTGCTGAAAAAAGTGAAAAGCAATGGACAAGTTGTTCCTGGTGCCAAATATTGTGTTACAGGTTCCACAGGGTATATTGGTTCATGGCTGGTGGAGGCTCTTCTTGAAAGGGGATGCAAGGTTCATGCCACTGTCAGAGATCCTGCAAAATCATTGCACCTTCTGTCTTTGTGGAAGGGTGGTGACCAATTGAGATTTTTCCAAGCGGATTTGCATAAAGAAGGAAGCTTCGATGAGGCTGTAAAAGGATGTGTTGGTGTGTTTCATGTTGCTGCTTCAATGGAATTCAATGTCACTGAGAATCAAAACAATGAGGCTTTTGTTAAAGCAAATATAATTGACCCTGCAATCAAAGGAACCATAAACCTTCTCAAGTCATGTTTGAAATCCAATTCTGTGAAAAGGGTTATTTTCACATCTTCCATAAGTACCATTACTGCCAAAGACAACAATGGAAATTGGAAACCTATTGTTGATGAATCTTGCCAAATTCAAACTGATAGTGTATGGAACACACAAGCAAGTGGATGGGTTTATGCACTTTCCAAGCTTCTAACTGAAGAAGCAGCATTTCAATTTTCAAAAGAGAATGGCATTGATCTTGTGTCAGTCGTTACAGGCACTGTTGCAGGCCCATTCTTCACTGCTAATGTGCCTACAAGTGTTAAAGTTCTTCTGTCACCATTAACAGGTGAAACTGAGCACTTCAAGATATTATCTGCTGTAAATGCACGAATGGGGTCAATTTCTTTAGTTCACATCGAAGATATATGCAATGCTCACATATTCCTAATGGAGCATGATAAAGCAGAAGGCCGTTACATATGCAGCAGTCAAAGTTGTACACTGTCAAACTTGGCTACTCTTCTTTCCAAAGTGTATTCTGGTTCAAATATCTATATGAAGATCGAGAAAAATTATGACAAAGTTCCTTCTGAGATTTCATCAAAGAAGCTAGAAGATTTGGGTTTTAGTTACAAGCATGGCCTTGAAGATATAATTCAACAAACAATTAATTGTTGCCTAGACTATAGCTATTTACCTCCTGTATAA 1062 0.3851 MEEVLKKVKSNGQVVPGAKYCVTGSTGYIGSWLVEALLERGCKVHATVRDPAKSLHLLSLWKGGDQLRFFQADLHKEGSFDEAVKGCVGVFHVAASMEFNVTENQNNEAFVKANIIDPAIKGTINLLKSCLKSNSVKRVIFTSSISTITAKDNNGNWKPIVDESCQIQTDSVWNTQASGWVYALSKLLTEEAAFQFSKENGIDLVSVVTGTVAGPFFTANVPTSVKVLLSPLTGETEHFKILSAVNARMGSISLVHIEDICNAHIFLMEHDKAEGRYICSSQSCTLSNLATLLSKVYSGSNIYMKIEKNYDKVPSEISSKKLEDLGFSYKHGLEDIIQQTINCCLDYSYLPPV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01281 353 CDD FR_SDR_e 20 327 - -
Cca04g01281 353 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 18 341 - -
Cca04g01281 353 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 18 341 - -
Cca04g01281 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 348 IPR036291 -
Cca04g01281 353 Pfam NAD dependent epimerase/dehydratase family 21 272 IPR001509 -
Cca04g01281 353 Gene3D - 16 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01281 Cca-Chr4 15769254 15774435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01281 11 349 Miscellaneous Gene Families AT4G27250 54.179 4.41e-129 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01281 - - gmx:100787267 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01281 04 15769254 15774435 Cca04g01281 04 15769254 15774435 ECH