Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01277 ATGACTAGTTCTAAGAAGCTGGAAGTTCACACAGATGATCAAACTCCACATAAATGGTGCACTCCTTTGGGAGAAGAGGTTTTCAAGAGATTCTTCAGCCAGGCTAATCCAACAGTGCACAAGATTTTTGGTGAAGGGTCACTTTTCAGTCCAATGTTGTTTGGAAAGTTCTTTGATCCTTCTGATGCATTCCCTCTATGGGAGTTTGAGTCTGATATCTTGCTATCTCATCTGAGGAGCTCCAACCAAAAGACTGTGGATTGGTATCAAACAGATGAAGGGTACATGTTGAAGGCAGAAGTACCAGGAAGTGGGTTAAGTAGCATTGAAGTCCATGTTGATAATGGGAAGGTTGTGGAAATTAGTGGACAATGGAAGCCCCAAAGAGACTCAAAGGCAAATGATTGGAGGTGTGGCCATTGGTGGGAATATGGATATGTTCGAAGACTAGAGATGCCAGAGGATGCAGATTTGAAGATTGTTGAAGCTCACATATATAATACCAGATTTTTGGAACTACGAATACCAAAGTGCCCTCAGGGAAAGCATGTGGTTTCAAGCAGTGTAAATTAA 573 0.4188 MTSSKKLEVHTDDQTPHKWCTPLGEEVFKRFFSQANPTVHKIFGEGSLFSPMLFGKFFDPSDAFPLWEFESDILLSHLRSSNQKTVDWYQTDEGYMLKAEVPGSGLSSIEVHVDNGKVVEISGQWKPQRDSKANDWRCGHWWEYGYVRRLEMPEDADLKIVEAHIYNTRFLELRIPKCPQGKHVVSSSVN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01277 190 SUPERFAMILY HSP20-like chaperones 51 182 IPR008978 -
Cca04g01277 190 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 180 - -
Cca04g01277 190 Gene3D - 25 186 IPR008978 -
Cca04g01277 190 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 77 190 IPR002068 -
Cca04g01277 190 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 1 180 - -
Cca04g01277 190 Pfam Hsp20/alpha crystallin family 87 182 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01277 Cca-Chr4 15708083 15709930 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01277 - - lang:109351887 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01277 04 15708083 15709930 Cca04g01277 04 15708083 15709930 ECH