Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01254 ATGCTAGAAGGCAAGGCTGTGATTGGTGAAACTGACATGCTCAAGACCATGCAGCAAGATGCCCTAGATTTAGCATCCAAAGCACTCGATTTCTTTGATGTCACTGAAGCCATCGAGATAGCCCGATTTATAAAGAAGGAATTTGATAGGATGCATGGACCTGGTTGGCAGTGTATCGTAGGCACTGATTTTGGTTCGTTTGTGACACACTGCTGTGGCTGTTTCATCTATTTCTGTTTAGGCAACATGGCCATTTTGCTGTTCAGGGGCTCAGCTGCTCCAGAGGCACATGAAAATCAGTTCTCGGCACTTGAGGCAGCAAAAGCAAAAGCATGA 336 0.4583 MLEGKAVIGETDMLKTMQQDALDLASKALDFFDVTEAIEIARFIKKEFDRMHGPGWQCIVGTDFGSFVTHCCGCFIYFCLGNMAILLFRGSAAPEAHENQFSALEAAKAKA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01254 111 Pfam Dynein light chain type 1 5 89 IPR001372 GO:0007017|GO:0030286
Cca04g01254 111 PANTHER DYNEIN LIGHT CHAIN 1 97 IPR001372 GO:0007017|GO:0030286
Cca04g01254 111 PANTHER DYNEIN LIGHT CHAIN 1 97 - -
Cca04g01254 111 SUPERFAMILY DLC 1 90 IPR037177 GO:0007017|GO:0030286
Cca04g01254 111 SMART Dynein_light_2 1 90 IPR001372 GO:0007017|GO:0030286
Cca04g01254 111 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 1 90 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01254 Cca-Chr4 15230371 15231565 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01254 K10418 - gmx:100779040 218.779