Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01240 ATGAGAAAGGAGTGTCATCCATTGTTAAGGGGAAGAAAAGGGGATACCAAATACAAACATGGATTTTCTGTTTCTGAGATGGAGTCACTAGCAAGCATATGTGAGGTTGTGCTTCCTCCTTTGCCAATGGATGCTCTCAAGATCAGAAAGGCAGACCAAGCTGATAATGATTCTTGGGATAGTGTGAAGTCCTTCTGGAACATTTCTGCTTCTCGTTATCCAATCCCTCATGAGGTTGCTAAGATATTAACTAAGAGGGGCTTAATAGAAGCAGTATTACTGGTTAGAGTGGTTTTATGGCTGCTGGCAACAAGGTTGGGAACCTTCTTGTTCTGTGGTTTCCTCTGCCTTGGCGAAAAATGGCCCTTTATCAACAACTTCTCAAACATATCTTTGGAGAAAAGAGAAAAGGTCATGCAGAAGTGGCTGAATCATAGGTTCCTCTCACCTATTAGGCTGGCATTTGTTTATATCAAAGTCTTGTGCCTCTATGTTTTTTTCTCTTGGGTTGATGAAAACGGTGATAACCCAGCATGGAAAGCCATTGGATATGAGGTATCAGATGATGAGAAATTGTCCAATGCCTCCAACACTAGGCCCCTTGAAAAGGGGATTATAGAAACGATGAATGAATCTGACTCAACTCTTGAACAATCTCTTGCTAAGAAAGGCCTCAATGTTACACTGGACTCCAAAAGCAACATCCTCAAAGTCAAATGTGATGCACTAGTTGTTGGTTCTGGATGTGGTGGAGGTGTTGCAGCTGCTGTTCTTGCTAGTGCTGGCCACAAGGTGGTTGTTCTTGAGAAAGGAAACTATTTTGCTCCTCAGGATTATTCATCCCTAGAAGGGCCTTCCTTGGATCAACAATATGAAACCGGAGGGATCCTTGCTTCTGTGGACTCCAGAATACTAATTTTGGCAGGTTCAACAGTTGGTGGAGGCTCTGCTATTAATTGGTCAGCCTGCATTAGAACCCCACACAAGGTCCTAAAAGAGTGGTCTGAGAACCAAAAGCTTCCCTTCTTTTCCAGCCAAGAATACCTTTCTGCAATGGACACAGTGTGTGAaaggattggtgtcacagaaaactgcacacaagaggggttccaaaaccaagtgctcagaaaagggtgtcaaaatcttggcctaaaagttgactgtgtgccaagaaactcttcagggaaccactactgtggctcatgtggttatggttgtccaaaaggagagaaacaagggactcaagccacatggcttgtggatgcagttgaccaaggtgcagTAATAATAACAGGATGCAAAGCTGAGAGGCTCTTGTTGGAAAGTAACAAGAATGGGAATGGAAGCAAAAAGAAGAAATGCTTGGGAGTGTTGGCAAAAGCCTTAAACAGCAAAGTCACAATGAAGCTACAAATTGAGGCCAAACTGACAATTTCTTCTGGTGGGGCACTTTTGACACCCCCTTTGCTTATCTCTAGTGGACTAAAGAATAAGAACATTGGTAGGAACCTTCATCTCCACCCTGTCCTAATGACATGGGGATACTTCCCAGAATCAAACTCAGAACTCAAGGGCAAAGTCTATGAGGGGGGTATAATCACATCAGTCCACAAAGTCCCATCAAATGACTCCAAATCAGACTCAAGAGCCATAATTGAAACCCCTTTGCTAGGACCAGCATCCTTTGCCTCACTGTGCCCTTGGGAGTCAGGGCTAGACTTTAAACAAAGAATGCTGAATTACCCTAGAACAGCACATTTCATCACAATAATAAGAGACAAGGCCAGTGGACAGGTAACTTCAGAGGGAAGAATCAGCTACAAGATAAATGAAACTGACAGAGAGAATCTGAGGGCTGGCTTGCAACAAGCACTGAGGATTCTGATAGCTGCAGGAGCAGCTGAAGTAGGTACTCACAGAAGTGATGGTCAGAGACTTAGGTGTAATGGAATTGGTGAAAACGAAGTGCAAGAGTTTTTGGACAGTGTGTGTCCAGTGGACGGGGCACTTTCACCAGGTGAACATTGGAACCTATATTGTTCAGCACACCAAATGGGGAGCTGCAGAATGGGGGTGAGTGAAAAAGAAGGTGCAGTTGATGAAAATGGAGAGACATGGGAGGCTCAAGGCTTGTTTGTTTGTGATGCTAGTGTGCTTCCAACTGCAGTTGGTGTCAACCCCATGATCACAGTCCAATCAACTGCATACTGCATATCTAATAGAATAGTTGACTATCTGAGAAAGGGTCAAATCTCAGAAGTTCGTTGA 2268 0.3955 MRKECHPLLRGRKGDTKYKHGFSVSEMESLASICEVVLPPLPMDALKIRKADQADNDSWDSVKSFWNISASRYPIPHEVAKILTKRGLIEAVLLVRVVLWLLATRLGTFLFCGFLCLGEKWPFINNFSNISLEKREKVMQKWLNHRFLSPIRLAFVYIKVLCLYVFFSWVDENGDNPAWKAIGYEVSDDEKLSNASNTRPLEKGIIETMNESDSTLEQSLAKKGLNVTLDSKSNILKVKCDALVVGSGCGGGVAAAVLASAGHKVVVLEKGNYFAPQDYSSLEGPSLDQQYETGGILASVDSRILILAGSTVGGGSAINWSACIRTPHKVLKEWSENQKLPFFSSQEYLSAMDTVCERIGVTENCTQEGFQNQVLRKGCQNLGLKVDCVPRNSSGNHYCGSCGYGCPKGEKQGTQATWLVDAVDQGAVIITGCKAERLLLESNKNGNGSKKKKCLGVLAKALNSKVTMKLQIEAKLTISSGGALLTPPLLISSGLKNKNIGRNLHLHPVLMTWGYFPESNSELKGKVYEGGIITSVHKVPSNDSKSDSRAIIETPLLGPASFASLCPWESGLDFKQRMLNYPRTAHFITIIRDKASGQVTSEGRISYKINETDRENLRAGLQQALRILIAAGAAEVGTHRSDGQRLRCNGIGENEVQEFLDSVCPVDGALSPGEHWNLYCSAHQMGSCRMGVSEKEGAVDENGETWEAQGLFVCDASVLPTAVGVNPMITVQSTAYCISNRIVDYLRKGQISEVR 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01240 755 SUPERFAMILY FAD/NAD(P)-binding domain 239 749 IPR036188 -
Cca04g01240 755 PIRSF Lg_Ch_AO 8 752 IPR012400 GO:0046577
Cca04g01240 755 Pfam GMC oxidoreductase 241 509 IPR000172 GO:0016614|GO:0050660
Cca04g01240 755 Gene3D - 225 542 IPR036188 -
Cca04g01240 755 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 748 - -
Cca04g01240 755 Gene3D - 596 751 IPR036188 -
Cca04g01240 755 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 1 748 - -
Cca04g01240 755 Pfam GMC oxidoreductase 599 737 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01240 Cca-Chr4 14882305 14887254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01240 81 749 Acyl Lipid Metabolism Gene Families AT3G23410 63.744 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01240 K17756 - gmx:100776182 1297.34