Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01176 ATGGAATCGCGTCCTCTGCACATAGCAATGTACCCATGGTTGGCCATGGGTCACCAAACCGCGTTCCTCCACCTCTGCAACAAGCTAGCCAAAAGGGGTCACAGAATCTCCTTCATCACCCCCTCAAAGGCACAAGCCAAGTTAGAACCCTTCAACCTTCACCCAAACCTTATCACCTTTGTTCCCATCACTGTTTCCCACGTTGAAGGGCTTCCCCATGATGCACAAACCACCGCAGATGTCTCATACCCTCTTCATACCCACATCATGACAGCCATGGACTTAACACAACACGACCTAGAAACCCTCCTTAGTGATCTCAAACCCCATCTTGTCTTCTACGACTTCACACACTGGATGCCAAAGCTAGCCAAGAGTTTAGGCATCAAAGGTGTGCACTATTGCACTGCTAGCTCTGTCATGGTGGGTTACACTCTCCCACCTGTGAGATACTATCATGGGACACAACTTTCTGAGAGTGACCTCATGGAACCCCCCGAAGGGTACCCTGATTCCTCCATCAAGCTTTTCTCACACGAGGCACGTGCCTTTGCTGGGAAGAGAAAGGAAACGTTTGGGAGTGATGTTCTTTTCTATGATCGCCAGTTCATTGCTATGAATGAGGCTGATGTGTTGGCTTACAGGACTTGTAGGGAAGTTGAAGGGCCTTATCTTGATTACATTGGGAAGCAGTTCAACAAGCCTGTGCTTTGCACTGGTCCCGTTATTCTGGACCCACCAACTTCTCAATTGGAGGAGAAGTTTGAGACGTGGCTTGGAGGGTTTGAGGCTGGCTCAGTGGTTTATTGCTGCTTTGGGAGTGAGTGCACTTTGAGGCCAAACCAGTTTCATGAGTTGTTGTTAGGGCTTGAGATTACCAACAAGCCTTTTTTGGCTGCTTTGAAGGCCCCACTAGGGTTTGAGACAGTGGAGGAGGCAATGCCTGAGGGGTTTCAAGAGAGGGTTGAAGGGAGAGGGTTTGTGTGGGGAGGGTGGGTTCTGCAGCAGCTGATTCTGGCACACCCTTCTGTGGGGTGCTTCATTACTCATTGTGGATCAGGGTCACTGTCTGAGGCATTGGTGAATAAGTGCCAGCTTGTGTTGTTGCCTAATGTTGGGGACCAGATTCTGAATGCAAGGATGATGGGGAACAACTTGGAGGTTGGTGTGGAAGTGGAGAAAGATGAGGAGGGGGTGTACTGCAAGGAGAGTGTGTGCAAAGCTGTGAGCATTGTGATGGATGATGAGAATGAAATTAGCAAGAAAGTTAGGGAAAATCATAGTAGGCTCAGGGATTTACTGCTTGACAAGGATTTGGAGTCCTCTTATGTTGACAACTTCTGCATGAAGCTTCAAGAGATTGTTGAGGGAGGTGGTTTGACTTGTACCAGTGATAGTTGTTGA 1404 0.4865 MESRPLHIAMYPWLAMGHQTAFLHLCNKLAKRGHRISFITPSKAQAKLEPFNLHPNLITFVPITVSHVEGLPHDAQTTADVSYPLHTHIMTAMDLTQHDLETLLSDLKPHLVFYDFTHWMPKLAKSLGIKGVHYCTASSVMVGYTLPPVRYYHGTQLSESDLMEPPEGYPDSSIKLFSHEARAFAGKRKETFGSDVLFYDRQFIAMNEADVLAYRTCREVEGPYLDYIGKQFNKPVLCTGPVILDPPTSQLEEKFETWLGGFEAGSVVYCCFGSECTLRPNQFHELLLGLEITNKPFLAALKAPLGFETVEEAMPEGFQERVEGRGFVWGGWVLQQLILAHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGNNLEVGVEVEKDEEGVYCKESVCKAVSIVMDDENEISKKVRENHSRLRDLLLDKDLESSYVDNFCMKLQEIVEGGGLTCTSDSC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01176 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 330 417 IPR002213 GO:0008194
Cca04g01176 467 Gene3D Glycogen Phosphorylase B; 1 256 - -
Cca04g01176 467 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Cca04g01176 467 PANTHER GLYCOSYLTRANSFERASE 2 454 - -
Cca04g01176 467 CDD GT1_Gtf-like 6 428 IPR002213 GO:0008194
Cca04g01176 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 441 - -
Cca04g01176 467 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 2 454 - -
Cca04g01176 467 Gene3D Glycogen Phosphorylase B; 257 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01176 Cca-Chr4 13584212 13585761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01176 6 456 Glycosyltransferase AT5G54010 44.690 1.99e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01176 K22794 K12933 gmx:100780270 797.734