Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01165 ATGCATGCTATAACAGTCATGGGTGACCTTACAGAAGATGGGTTCTTGGACCGGAGTGGTTCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGGGGGATCGATCTGCATCTCTTTCCAGATCACACACTATTTAAGGGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAGATGCTAGAGGATAAGCCGTGGAAATTTCAGGCAAATGCATATGGCATTTGTGCTATTGTCCATATGATGTTGCATAACTCCTATATGGAAATCGTCAAAAAAGAACAATCTGATGGGAGCTACGTTTACTGGAACATTGAGCTCTGGAAGACTTTCTTCACTAAGATGCTAAACCAATACCCCCACGATGATGATAGGAGGTTGCTGCAGGATTTGAAGAAGTCCTTCCAGGACTACATGGGCTCCAATCCGCAGCTTATAAAGAAACTGAAGGAGTTACTCTCAAAGCAAAGGGCTTCCTTATGTTCTGCTTAA 495 0.4404 MHAITVMGDLTEDGFLDRSGSWCDQGLCLVDWGRGIDLHLFPDHTLFKGDCRTSGFRCIEMLEDKPWKFQANAYGICAIVHMMLHNSYMEIVKKEQSDGSYVYWNIELWKTFFTKMLNQYPHDDDRRLLQDLKKSFQDYMGSNPQLIKKLKELLSKQRASLCSA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01165 164 Gene3D Transferase(Phosphotransferase) domain 1 4 161 - -
Cca04g01165 164 SUPERFAMILY Protein kinase-like (PK-like) 22 122 IPR011009 -
Cca04g01165 164 PANTHER BUB1 KINASE, ISOFORM A-RELATED 8 163 - -
Cca04g01165 164 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 163 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01165 Cca-Chr4 13389287 13390265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01165 K02178 - gmx:100802272 306.219