Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01136 ATGGAGCTCACTATTACACAGCCTGATGATTGGCATCTTCACCTCCGTGATGGTTCCCTTCTTGAAGCTGTCCTCCCTCAGAGTGCAAAGCATTTTGGAAGGGCTATAGTGATGCCAAATTTGAAACCACCCATCACTTCCACGGCTGCTGCTATCACTTATCGAGAGTCCATTTTGAAAGCAATACCTAAAGATAGCAACTTCACTCCTCTCATGACACTTTACCTCACAGACATGACTACTCCTGATGAGATTAAACTTGCAAAAAAAAGTGGACTTGTTTATGGTGTGAAGTTGTATCCTGCCGGTGCTACAACAAACTCCCAAGATGGTGTTACAGATCTTTTCGGAAATTGTCTTCCTGTTCTTGAGGAGATGGCTGAGCAAAATTTACCATTACTGGTTCATGGAGAGGTTACAAATTCAACCGTTGATATTTTTGATCGGGAAAAGGTCTTTATTGAAACAATTTTAGAGCCTTTAGTTCAAAGGCTTCCACAGCTGAAGGTTGTGATGGAGCATATTACTACTGCAGATGCTGTTAAATTTGTAGAGTCTTGCAAAGAAGGTTACGTAGCAGCAACTGTTACGCCACAGCATCTTCTTCTGAATCGTAATGCTTTATTCCAAGGTGGCTTACAGCCTCACAATTACTGTCTTCCAGTGCTCAAAAGAGAGATCCATAGACAGGCTATTGTTTCGGCTGTCACTAGTGGAAGTAAACGATTTTTCCTTGGAACTGATAGTGCTCCACATGATAGGCTTAAAAAGGAATGTGCCTGTGGATGTGCTGGCATATACAACTCCCCGGTTGCTCTGCCACTATATGCCAAAGTTTTTGAAGAGGCTGGTGCACTTGATAAGCTGGAGGCTTTTACAAGCTTTAATGGACCTGACTTCTATGGCCTCCCCAGAAACAAGTTACAGATTAAACTGAGGAAAGCTCCTTGGAAAGTACCTGATTTTCTATCGTTTCCATTTGGAGACATCGTTCCCATGTTTGCTGGTGAAACCCTTGAATGGGAAGCATTGTCTTGTTGA 1041 0.4265 MELTITQPDDWHLHLRDGSLLEAVLPQSAKHFGRAIVMPNLKPPITSTAAAITYRESILKAIPKDSNFTPLMTLYLTDMTTPDEIKLAKKSGLVYGVKLYPAGATTNSQDGVTDLFGNCLPVLEEMAEQNLPLLVHGEVTNSTVDIFDREKVFIETILEPLVQRLPQLKVVMEHITTADAVKFVESCKEGYVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHRQAIVSAVTSGSKRFFLGTDSAPHDRLKKECACGCAGIYNSPVALPLYAKVFEEAGALDKLEAFTSFNGPDFYGLPRNKLQIKLRKAPWKVPDFLSFPFGDIVPMFAGETLEWEALSC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01136 346 Pfam Amidohydrolase family 10 321 IPR006680 GO:0016787
Cca04g01136 346 ProSitePatterns Dihydroorotase signature 2. 246 257 IPR002195 GO:0016812
Cca04g01136 346 Gene3D - 1 343 - -
Cca04g01136 346 PANTHER DIHYDROOROTASE 1 343 IPR004721 GO:0004151|GO:0019856
Cca04g01136 346 TIGRFAM pyrC_dimer: dihydroorotase, homodimeric type 2 342 IPR004721 GO:0004151|GO:0019856
Cca04g01136 346 CDD DHOase 3 341 IPR004721 GO:0004151|GO:0019856
Cca04g01136 346 SUPERFAMILY Metallo-dependent hydrolases 2 342 IPR032466 -
Cca04g01136 346 Hamap Dihydroorotase [pyrC]. 1 344 IPR004721 GO:0004151|GO:0019856
Cca04g01136 346 ProSitePatterns Dihydroorotase signature 1. 10 18 IPR002195 GO:0016812
Cca04g01136 346 PIRSF Dihydroorotase 1 345 IPR004721 GO:0004151|GO:0019856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01136 K01465 - gmx:100815210 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01136 04 13025748 13032903 Cca04g01136 04 13025748 13032903 ECH