Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca04g01134 | ATGCTGCATGAAGAGAACATTGATGTTAGAAGTGCCAATTTCTCACACACTGGAGACTCGCTGCTTTATGTTGTGCATGCAGAGATTCCTCAATCTCTTCTTCAATTCGGAGCAACCAAAGTGAGTGAGAGATTGAAAAGGTTTGTGAATGGATCCTGCAGTGATGTGGAAACACAGCCTGAGTTGTGGGATTATGAAATTGGTACAGATGATATGTGGGGTTTCTAG | 228 | 0.4254 | MLHEENIDVRSANFSHTGDSLLYVVHAEIPQSLLQFGATKVSERLKRFVNGSCSDVETQPELWDYEIGTDDMWGF | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca04g01134 | 75 | PANTHER | ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED | 1 | 56 | IPR015660 | GO:0003700|GO:0006357 | |
| Cca04g01134 | 75 | PANTHER | HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN | 1 | 56 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca04g01134 | Cca-Chr4 | 12977975 | 12979243 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca04g01134 | - | - | gmx:100805461 | 141.739 |