Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01130 ATGACCATAATTTTAAGGATTAGCGAAAATCAGAGCAGAGAGAGTGAACCACGCCGAGTCACTGTCCGAAGCAAAGACCAGCAAGGTCAAAATTGGAGCTTGTTGTTGCGAATGACAAAAGAAGAAGAACCCACTTCACCGATGCATCCACCTCCTTCATACACCTTAGTCCTAAACATCATGAGCAAAAGAAGAACATGGGCATGTCTCTTTCTCTTAGTTTACGGTACCCTTTTGGCCTCTTCATGGAACTTCCTCAAATCCACGCTTTCATGGTACAACCTCCAAGTTCAGTCCTCAACTTCGGCGTGGCCCGCACTCTACGCCTCGGTGCTTCTGGGCACCGTGTTTGGGGCACTATCCATGGTGGCAGCGTTGGTGGTTATGGTTCCCGCGGTGGTGGTGACGTGGATCACCGTCGTGGTGCTTTTGGCCTTCTTTGGGAAGCCTAGGAGGACCCTGGTGGTGGAGGGGAGGAAGATCACTCGGGAAATTTTTGGGTTTGTGGTGAGGATTTTGTTGAAAGAAGGCAACTTTGTGGCTGCGGTTTGTGCTGTTTTGGGGTATTTTGTTCTTTTTGGGAGGTTGTTGTCACATGGGGTTTGCATAATCATGCTGGTTTTTGCAAAATCAAGCATGGTTTGGGTTTATTTCACTGATATTAGGGTCAATGGAGTTGTTTTGAAAGATATCTGCCACCTCCCATTAATGGTAAACATCATGGAGAAAGGCCTCCCATCTCATATCACTTTTAATTGCCCTCATTCTTCTTATTTGCTCTATTGGCCCAAATACTGTGAAAGGAGTAGCTAA 813 0.4649 MTIILRISENQSRESEPRRVTVRSKDQQGQNWSLLLRMTKEEEPTSPMHPPPSYTLVLNIMSKRRTWACLFLLVYGTLLASSWNFLKSTLSWYNLQVQSSTSAWPALYASVLLGTVFGALSMVAALVVMVPAVVVTWITVVVLLAFFGKPRRTLVVEGRKITREIFGFVVRILLKEGNFVAAVCAVLGYFVLFGRLLSHGVCIIMLVFAKSSMVWVYFTDIRVNGVVLKDICHLPLMVNIMEKGLPSHITFNCPHSSYLLYWPKYCERSS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01130 270 PANTHER PYRROLINE-5-CARBOXYLATE REDUCTASE 40 195 - -
Cca04g01130 270 PANTHER PYRROLINE-5-CARBOXYLATE REDUCTASE 40 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01130 Cca-Chr4 12896023 12898075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01130 - - gmx:100811991 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01130 04 12896023 12898075 Cca04g01130 04 12896023 12898075 ECH