Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01113 ATGATGGAGAAGATCCAGCACAGTCATGTGGAAGTGAATGGACTGAAGCTGCATGTGGCAGAGATTGGAAGTGGCTCCAAGGCAGTGGTGTTCTTGCATGGATTCCCAGAGATCTGGTACACATGGAGGCACCAAATGATTGCTGTGGCAAACGCTGGTTATAGGGCTATTGCCTTTGATTTCAGAGGCTATGGACTCTCTCAGCATCCACTTGAGCCAGAAAAGGAAACCATGTTTGACCTGGTTCCTGAAATTGAGGGTCTTTTGGATGCTTTAAACATCACCAAGGCTTTCCTTGTTGGCAAGGATTTTGGTGCAATCCCAGGATATCTTGCAGCTGCTGTGCGCCCAGAAAGAGTAGCTGCCATCATAACTTTGGGCGTTCCTTTCTTGCTTCCTGGTCCCTCTGCTGTCCAAAACCACCTTCTTCCCAAAGGCTTCTATATTACTAGGTGGCAGGAGCCTGGGAGGGCAGAAGCTGATTTTGGACGCTTTCCTGTGAAATCAGTGATAAGAAACATATACACTCTCTTCTCTAAAAGTAAGGTGCCAATAGCACCTGATGATAAAGAAATCATGGATTTGTTTGACCCTTCTACTCCCTTACCTCCATGGTTCTCTGAGGAAGATCTTGCAACCTATGCTTCGTTATATGAAAAATCTGGATTCAGATACGCATTACAGGTTCCTTACAGGAGTCTGAATGTGGAAACTGGCTTAAGTGACGTGAAGGTTACGATTCCAGCACTTTTGATAATGGGTGAGGAAGATTACGTGTTTAAGTTTCCAGGCATGGAAGACTATATCCGAAGTGGGGCAGTGAAAAACTTTGTGCCGGGGTTGGAAATCATATACATTCCAGAAGGAAGCCATTTTGTGCATGAACAAAATCCAGAGAAGGTGAATCAACTCATCATCGAGTTCCTCGACAAACAAAGTATCTGA 945 0.4497 MMEKIQHSHVEVNGLKLHVAEIGSGSKAVVFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSQHPLEPEKETMFDLVPEIEGLLDALNITKAFLVGKDFGAIPGYLAAAVRPERVAAIITLGVPFLLPGPSAVQNHLLPKGFYITRWQEPGRAEADFGRFPVKSVIRNIYTLFSKSKVPIAPDDKEIMDLFDPSTPLPPWFSEEDLATYASLYEKSGFRYALQVPYRSLNVETGLSDVKVTIPALLIMGEEDYVFKFPGMEDYIRSGAVKNFVPGLEIIYIPEGSHFVHEQNPEKVNQLIIEFLDKQSI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01113 314 Gene3D alpha/beta hydrolase 2 313 IPR029058 -
Cca04g01113 314 PANTHER EPOXIDE HYDROLASE 3 312 - -
Cca04g01113 314 SUPERFAMILY alpha/beta-Hydrolases 2 311 IPR029058 -
Cca04g01113 314 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Cca04g01113 314 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Cca04g01113 314 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Cca04g01113 314 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Cca04g01113 314 PRINTS Epoxide hydrolase signature 247 263 IPR000639 GO:0003824
Cca04g01113 314 PRINTS Epoxide hydrolase signature 286 308 IPR000639 GO:0003824
Cca04g01113 314 Pfam alpha/beta hydrolase fold 28 296 IPR000073 -
Cca04g01113 314 PANTHER EPOXIDE HYDROLASE-LIKE PROTEIN 3 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01113 Cca-Chr4 12635157 12637254 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01113 2 311 Acyl Lipid Metabolism Gene Families AT4G02340 37.618 5.24e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01113 - - gmx:100812544 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01113 04 12635157 12637254 Cca04g01113 04 12635157 12637254 ECH