Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01110 ATGATGGAGAAGATTCAACACAGTCACGTGGAAGTGAAGGGACTGAAGTTGCACGTGGCAGAGATTGGAATTGGCTCCAAGGCAGTGGTATTTTTGCATGGTTTCCCAGAGATCTGGTACACATGGAGGCACCAAATGATTGCTGTGGCAAACGCTGGTTATAGGGCTATTGCCTTTGATTTCAGAGGCTATGGACTCTCTCAGCATCCACTTCACCCAGAAAAGGAAACATTGATTGACCTGGTTAATGAAATTGTGGGTCTTTTGGATGCTTTAAACATCAGCAAGGCTGTCCTTGTTGGAAAGGATTTTGGTGCCTTCCCAGGACACCTTACAACTGCAATGCACCAAGAAAGAGTAGCTGCTATCATAACTTTAGGCATTCCTTTCATGCTTCCGGGTCCCCTTGCAGTAGAAGGCCACCTTCTGCTCCCCAAAGGCTTTTATATTAATAGGTGGCGGGAGCCTGGGAGGGCAGAAGCAGATTTTGGCCGTTTCCCTGTGAAATCAGTGATAAGAAACATATACACTCTCTTCTCTAAAAGTGAGCTGCCAATAGCACCTGATGATAAAGAAATCATGGACTTGTTTGACCCTTCTACTCCCTTGCCTCCATGGTTCTCCGAGGAAGACCTTGAAACCTATGCATCATTGTATGAAAAATCTGGATTCAGTTATGCATTGCAGGTTCCTTACAGGTGCATGAATGTGGATGCTGGCTTAAGTGATGTAAAAGTTACTATTCCAGCACTTCTGATAATGGGTGAGAAAGATTATGTGTACAAGTTTCCAGGCATGGAGGACTATATTCGAAGTGGGGCAGTGAAAAATTTTGTGCCTGGCTTGGAAATCGTACATATTCCAGAAGGAAGCCATTTTGTGCATGAACAAATGCCAGAGAAGGTGAACCAGCTCATCATTGAGTTCCTTCACAAACAAAGTATCTGA 948 0.443 MMEKIQHSHVEVKGLKLHVAEIGIGSKAVVFLHGFPEIWYTWRHQMIAVANAGYRAIAFDFRGYGLSQHPLHPEKETLIDLVNEIVGLLDALNISKAVLVGKDFGAFPGHLTTAMHQERVAAIITLGIPFMLPGPLAVEGHLLLPKGFYINRWREPGRAEADFGRFPVKSVIRNIYTLFSKSELPIAPDDKEIMDLFDPSTPLPPWFSEEDLETYASLYEKSGFSYALQVPYRCMNVDAGLSDVKVTIPALLIMGEKDYVYKFPGMEDYIRSGAVKNFVPGLEIVHIPEGSHFVHEQMPEKVNQLIIEFLHKQSI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01110 315 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Cca04g01110 315 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Cca04g01110 315 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Cca04g01110 315 PRINTS Epoxide hydrolase signature 248 264 IPR000639 GO:0003824
Cca04g01110 315 PRINTS Epoxide hydrolase signature 287 309 IPR000639 GO:0003824
Cca04g01110 315 PANTHER EPOXIDE HYDROLASE-LIKE PROTEIN 3 313 - -
Cca04g01110 315 SUPERFAMILY alpha/beta-Hydrolases 2 311 IPR029058 -
Cca04g01110 315 Pfam alpha/beta hydrolase fold 28 295 IPR000073 -
Cca04g01110 315 Gene3D alpha/beta hydrolase 2 314 IPR029058 -
Cca04g01110 315 PANTHER EPOXIDE HYDROLASE 3 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01110 Cca-Chr4 12609837 12613019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01110 2 312 Acyl Lipid Metabolism Gene Families AT4G02340 35.737 5.44e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01110 - - gmx:100811690 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01110 04 12609837 12613019 Cca04g01110 04 12609837 12613019 ECH