Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01103 ATGAGGCTGAGGAAGCGTAAACGATGTTTTCCTTCTTGTTCCTCTCTTCGCAAAGTTGACGAGGATGAGATTTATTGGAGACAGAGAAAGGAAGATGAAGAGTTGGAATGGACACCAAATTCCACTCACTTAATATCTCAGTTGACTCAATGTTTTACTAATGCTATGGTTGGATCAAGATCATGGATAGGAGGACTCTTTCACCGCATAAACACCAAGCAAAATGAAAAATTTGTTGACTATCCTTTGAGTCCTGTTGAGGAGGAAAGACTTCATAGGCTTCAAGAACGGGTGCAAGTGCCTTATGATGAGACTCGTCCTGATCATCAAGAATCATTAAGAGCTTTATGGGATTGTTCCTTTCCTAATGTATCTCTGGAAGGCTTAATATCTGACCAATGGAAAGATATGGGATGGCAAGGTCCTAATCCATCGACTGACTTTAGGGGATGTGGCTTCATTTCCCTTGAAAATCTACTGTTTTTCGCAAGGAAATATCCGGCATCTTTTCACAGGCTGTTGTTGAAGAAAGATGGAAATAGAGCAACATGGGAATATCCATTTGCTGCTGCTGGCATTAATATATCATTTATGTTGATACAGATGTTGGATTTATGCTCAGAAAAGCCACGATGTCTTCCGGGAATGAATTTTGTCAAGTTATTAGGAGAAAATGAAGAAGCATTTGATGTTCTATATTGTATAGCTTTCGAGATGATGGATGCGCAATGGCTGGCTATGCATGCTTCCTACATGGATTTTAACGAGGTTCTGCAAGCAACACGAATACAATTGGAGAGAGAGTTATCCTTAGAAGACATCAACAAAATACAAGAGCTGCCTGCTTACAATCTGTTGTAA 861 0.3984 MRLRKRKRCFPSCSSLRKVDEDEIYWRQRKEDEELEWTPNSTHLISQLTQCFTNAMVGSRSWIGGLFHRINTKQNEKFVDYPLSPVEEERLHRLQERVQVPYDETRPDHQESLRALWDCSFPNVSLEGLISDQWKDMGWQGPNPSTDFRGCGFISLENLLFFARKYPASFHRLLLKKDGNRATWEYPFAAAGINISFMLIQMLDLCSEKPRCLPGMNFVKLLGENEEAFDVLYCIAFEMMDAQWLAMHASYMDFNEVLQATRIQLERELSLEDINKIQELPAYNLL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01103 286 Pfam ELMO/CED-12 family 92 258 IPR006816 -
Cca04g01103 286 PANTHER ENGULFMENT AND CELL MOTILITY 53 286 - -
Cca04g01103 286 PANTHER BNAC05G01970D PROTEIN 53 286 - -
Cca04g01103 286 ProSiteProfiles ELMO domain profile. 108 269 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01103 Cca-Chr4 12502940 12507904 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01103 K23538 - gmx:100811853 568.155