Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01090 ATGAGGAAAAATGTTGGCTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGGATTCTCCCCTTTTTTGCTAGTTTGATTATATCAATGAGTCTGGTTCTGACGGCTATTCTTGGGGTACTTAGTTCTGATGGTGGGGGAGAGCAGCCACCTTTTGAAATCATTTCCTTCAAGAGTTCAGAGGATTCCAGTGGATATTTTGTGGAATCGGATATAGAAAGGTCTTTTAATGTTAGTGTGGTGAAAATGGAGGCACCAAGGTTTGCATACCTTATTTCGGGCACCAAGGGTGATAGTCATAGGATGATGAGGACATTAGAGGCAGTGTACCACCCAAGGAATCAGTACATCTTGCATTTAGATCTCGAGGCGCCGCCCCGGGAAAGGTTGGAATTGGCAAATGCTGTAAAAGCTGATCCAGTATTTCGTGAGGTGGAAAATGTGCGTGTTATGTCTCAATCCAATTTGGTAACTTATAAGGGTCCAACGATGATTGCTTGTACCCTCCAAGCTATTGCAATATTATTGAAGGAAAGTTCAGAGTGGGATTGGTTTATAAATCTCAGTGCCTCAGATTATCCTCTTATGACACAGGATGATTTGCTTCACGTCTTCTCAAACCTGTCAAGAAATCTCAATTTCATTGAACATACACGCATTGCTGGTTGGAAACTGAACCAAAGAGCAAGACCCATCATTATTGATCCTGCCCTTTACTTATCAAAGAAATCTGATTTAGCATTGACTACTCAACGTAGAACACTTCCCACATCCTTTAAACTGTTTACTGGTTCAGCTTGGGTTGTACTGACTCGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCGCGGACTATGCTAATGTACTATACAAATTTCATCTCCTCACCAGAGGGATATTTTCACACTGTCATTTGTAACAATGAAGAATTCCGTCACACTGCAATAAGCCATGATCTTCACTACATTGCTTGGGACACTCCCCCAAAGCAGCATCCCATCTCTTTAACTATGAAGGACTTCGATAAAATGGTTAAAAGCAAGGCGCCTTTTGCGCGCAAGTTTGCGAAGAATGATCCAGTGCTAGACAAGATTGACAAAGAACTTCTGGGGCGCACACATAGATTTTCACCTGGGGCATGGTGTGTTGGGACCTCAGATGGTGGGGCTGACCCTTGTTCTGTTCGTGGCAATGATACAATGTTTAGGCCAGGGCCTGGTGCTGAGAGGCTACATGAGCTGATTCAGGTTCTGTTATCTAAAGAATCTCTAAACAAGCAGTGTTTGTGA 1299 0.4303 MRKNVGSHSGRMFSDRKWILPFFASLIISMSLVLTAILGVLSSDGGGEQPPFEIISFKSSEDSSGYFVESDIERSFNVSVVKMEAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPVFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLMTQDDLLHVFSNLSRNLNFIEHTRIAGWKLNQRARPIIIDPALYLSKKSDLALTTQRRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFISSPEGYFHTVICNNEEFRHTAISHDLHYIAWDTPPKQHPISLTMKDFDKMVKSKAPFARKFAKNDPVLDKIDKELLGRTHRFSPGAWCVGTSDGGADPCSVRGNDTMFRPGPGAERLHELIQVLLSKESLNKQCL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01090 432 PANTHER BNACNNG43180D PROTEIN 5 425 - -
Cca04g01090 432 Pfam Core-2/I-Branching enzyme 88 347 IPR003406 GO:0016020|GO:0016757
Cca04g01090 432 PANTHER GLYCOSYLTRANSFERASE 5 425 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01090 Cca-Chr4 12170894 12176258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01090 81 431 Glycosyltransferase AT1G03520 78.917 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01090 - - gmx:100795146 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01090 04 12170894 12176258 Cca04g01090 04 12170894 12176258 ECH