Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01089 ATGGCTTACAACAAGGGGTTGCATTTACATAGCAGTGGAGGGAGTCACAGAGGAAGGCCTTATGCGTTGATATTGCTGATCACATTTGGGGTGGCACTGCTTGGGGTTATGGTGCTTCATAAGCTAAGAGAGAGACGCATCTATGCCCTTATTGTCAAGGAGAAAGACCACCAGATTCTTGCCCTTCAGCTTCTCCTGCAGAAGGAAAGAGATCGCAGCAaagagttgagagggaagaacgaagagatgaaggggaagaTCTACGCCCTGAGAAGTAAGAAGATGGAGCTAGGTAGAACAGTTGTGGAGATGCAATCCACCCTGAATTCACTGAAAGATGAGCAGAAACTGATGGAATCAGCATTTGAGGAGCAGCAGAATGAGCTGAGATTGATGCAAGAAAAGGAACGCAATGTGCGAGAAGGAGGCTCTGAAATAGTAGCATTAAGGGAGAATCTTGAGCATAAGGAAGAAGAGATAAAGGACTTGAAGCGCAGCTTTGAAATCCCTGTTAATGATAATCAAACCATCTTTCCTGAAAGCCAGAGAGCAAATGAAACAATGACAGCACAAGATGAAAGTGACAAAGATGACTCTTTCAAATATGAGGGTGAAGACGATGAGGATGCAAGTAAAAGTGAATTAACCGATTTTAAAGATGGGGATGTTGGAACTGAGATAAAAGATGAAATTCGGACTAATAGGGAGGTAGGAAAGACAAATGAAGATCCTCAAGACGAAGGTGGTGTCAGGGCAAAAGATATTGATGATGCTGAAGTGGTGGATgaaagagaaaagaaaacaataagagaagagaatgcagcacaagtagagaatagtacagaaGGTGAAGGTCAGGATGTTAAGGTGAAACAATCTACTGGGATGAAGAAGAAACATGGCCGTGCAAGCAGAAAAAAGGGGAATCGGAGAGGCATTGTGAAAAATAGTTTGATGGAGAACAATGGAGTTTTTGATAACCTCATGAACAATAGAAAGGTTAACAAAGATGAGTTGAAAGGTAGAAGAGTTGGAAAAGTTTCTGATGAGGAAAGTTTTGCAAGAAAAGATGAGGAGAGGGACAATGATAACCCAAGAAAAGGCAAGCCACAAGCCAAATTGCTAAAGCCTGAAAACAAAGATGTCAATGACATGAAGGTGAATGATACAAATCAGTGGGTGACAAATAGTGGAACTAACATATACCCAGAGAAACAGAAACTGGATGAAATGAGACAGTCGGAAGAGAATGAAAAGAGTATTATCCAACAAAACTGGAGCAAGAAGCATATCAACAAAGCTAACAAGAATGCAGGACTAACAAAATCCAAGGTGTTACCTGAAGAGCTAAAAGAATTAGAGGATGTACAAACACAGGAGAAAGATGCGACTGACAATGGCCATGATGATGATTTCTTAAAGGAATCTGAATCTGAGGATGAGAAGGGTGAATACAGAGAAGAGAAAGATGAATCATCCATGCTAGAGTAG 1491 0.3856 MAYNKGLHLHSSGGSHRGRPYALILLITFGVALLGVMVLHKLRERRIYALIVKEKDHQILALQLLLQKERDRSKELRGKNEEMKGKIYALRSKKMELGRTVVEMQSTLNSLKDEQKLMESAFEEQQNELRLMQEKERNVREGGSEIVALRENLEHKEEEIKDLKRSFEIPVNDNQTIFPESQRANETMTAQDESDKDDSFKYEGEDDEDASKSELTDFKDGDVGTEIKDEIRTNREVGKTNEDPQDEGGVRAKDIDDAEVVDEREKKTIREENAAQVENSTEGEGQDVKVKQSTGMKKKHGRASRKKGNRRGIVKNSLMENNGVFDNLMNNRKVNKDELKGRRVGKVSDEESFARKDEERDNDNPRKGKPQAKLLKPENKDVNDMKVNDTNQWVTNSGTNIYPEKQKLDEMRQSEENEKSIIQQNWSKKHINKANKNAGLTKSKVLPEELKELEDVQTQEKDATDNGHDDDFLKESESEDEKGEYREEKDESSMLE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01089 496 MobiDBLite consensus disorder prediction 418 439 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 274 288 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 295 312 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 331 385 - -
Cca04g01089 496 Coils Coil 108 166 - -
Cca04g01089 496 PANTHER OS08G0177500 PROTEIN 1 492 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 173 188 - -
Cca04g01089 496 Coils Coil 405 425 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 173 496 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 386 403 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 445 496 - -
Cca04g01089 496 Coils Coil 66 86 - -
Cca04g01089 496 PANTHER OS08G0177500 PROTEIN 1 492 - -
Cca04g01089 496 MobiDBLite consensus disorder prediction 205 273 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01089 - - gmx:100791306 647.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01089 04 12165147 12167192 Cca04g01089 04 12165147 12167192 ECH