Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01057 ATGAGATCCGAGAAGAGGAGATCATGGAGAAGGGATGAAGCGGGCGAAGAAGAGAGAGTAAAGATGGACACAGAAATAGACAAATTCCTAAAGAGGCTATCGTGCGCAGCGATCGTAGTGGCTTCTCTCACACTCCTCTTCCTCTTCCTCCGCACGCCCGACACGTGCGTCCCCCACCGCCAACTCCGCTTCCCCGGCTCCACCTGCGACTTCTCCACGCGCCTCCACGTCCCCGCCCACAAGCGCGCCCTCCGCCTCCGCTCCACGCGCCTCTGGGCGGCCAAGGTCCGCTCCTTCTCCCTCCTCTTCCGCGACCTCCCCCTCCTCCGCAACCACTCCCGCGTCCTCTGCGTCTCCGCCGGCGCCGGCCACGAGGCCGACGCCCTCTCCGCCCTCGGCGTCCACGACGTCACCGCCGTCGAGATCCTCGACTCGCCGCCGCTCGTCGCCCGCGCCGACCCCCACAACCTCCCCTTCTTCGACGCCGCCTTCGACCTCGCCTTCACCGCGCGCTTCGACGAGGCGCTCTTCCCCGCGCGCTTCGCCGCCGAGATGGAGCGCGTCGTCCGCCCCGGCGGCGCCTGCTTCGTACTCGTCGCGGAGTGCTCCGCCGACGAGGCCGACGAGGTCGTTCAGCTCTTCAGGAATTCGAAGCTTGTTTGGTCGCATAATGTTTCCTTGAGTGGAATCCGAATGACCGAAACTTGGATGTCTGAGAATCTGTGA 726 0.6515 MRSEKRRSWRRDEAGEEERVKMDTEIDKFLKRLSCAAIVVASLTLLFLFLRTPDTCVPHRQLRFPGSTCDFSTRLHVPAHKRALRLRSTRLWAAKVRSFSLLFRDLPLLRNHSRVLCVSAGAGHEADALSALGVHDVTAVEILDSPPLVARADPHNLPFFDAAFDLAFTARFDEALFPARFAAEMERVVRPGGACFVLVAECSADEADEVVQLFRNSKLVWSHNVSLSGIRMTETWMSENL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01057 241 PANTHER F21J9.14 22 239 - -
Cca04g01057 241 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 22 239 - -
Cca04g01057 241 CDD AdoMet_MTases 114 193 - -
Cca04g01057 241 Pfam Methyltransferase domain 120 197 IPR013216 GO:0008168
Cca04g01057 241 Gene3D Vaccinia Virus protein VP39 89 239 IPR029063 -
Cca04g01057 241 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 101 216 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01057 - - gmx:100818603 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01057 04 11611776 11612894 Cca04g01057 04 11611776 11612894 ECH