Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01049 ATGGCTAGAGTAGCAGGAATTTTCCTGTGTCTCCTGATTTTAATCATGGATGTTGCAGCTGGGATTCTTGGCTTCGAGGCTGAAATAGCACAAAACAAGGTTAAGCACTTAAAATTGTGGATATTTGAGTGTAGAGAGCCAAGTCATCAAGCCTTCATGTTGGGGTTGGGTGCAGCAGTGCTTTTGGGACTAGCTCATGCTATAGCCAACTTGCTTGGGGGCTGCAATTGCATTTGTTCTCAACAAGAGTTTGAGAAGGCTTCCTCCAATAGACAAATCTCAACAGCTTGCCTTATTTTAACTTGGGTTGTGTTGGCCATTGGAATGTCCATGCTGGTGATAGGGACCATGTCAAACAATAGGTCAGATGGATCCTGTGGTTTCTCACACCATCACTTCCTGTCCATTGGTGGGATCTGTTGTTTTGTTCATGGCCTATTCTCTATTGCATATTACGTTTCTGCCACTGCCTCAATGGATTAA 483 0.4389 MARVAGIFLCLLILIMDVAAGILGFEAEIAQNKVKHLKLWIFECREPSHQAFMLGLGAAVLLGLAHAIANLLGGCNCICSQQEFEKASSNRQISTACLILTWVVLAIGMSMLVIGTMSNNRSDGSCGFSHHHFLSIGGICCFVHGLFSIAYYVSATASMD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01049 160 Pfam Protein of unknown function (DUF1218) 58 145 IPR009606 -
Cca04g01049 160 PANTHER OS07G0462200 PROTEIN-RELATED 2 160 - -
Cca04g01049 160 PANTHER PROTEIN, PUTATIVE-RELATED 2 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01049 Cca-Chr4 11550773 11552111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01049 - - gmx:100787042 310.457