Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01040 ATGGGAGGCACTATTACTATTCATTATTATGTTTCTCTTGTTATTCCTGTTAATGGGAGGAGAGACTATTTAGGTAATGACTTGAGGGATAAACTTGACAGAAGGTTTTTATCTCCTCGAAGGTACTCACCAGCTCAAGATGCAAGAGGCCGCCAGACCATCCGTGAATACAGTCCTTCGAGGTCTTTGGAGAAGAAAAGTGACAGAAGACATAGGAGAAATTTGAAAGTCTCAGATAGAGTTGAAGAAGGAAAATTGCTTCCATCTGGTTCTAGGAATTCTCTTGAGGAGCAGCTGAAGAAAGTAGATTCAGATATCAACACTCTTAATAACCGAAAATTCCAGCTAGAGGTCTACCTTGATGAGAGTGTTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAACTTGAAGCTCAATTATGCCAAGAGGATGATGAGTGCAAAAGAATTACTTCAAGAATAAGGAAATTTGTTAGGGTGCACAATCATACGTCAAAGTTACAAGATGAACTGAAGAGATCACAAGTCCGACTTCAAAGGTTTGGAGATCAGCTTGTCTCAGATATTTCTAGAATTGGTGCTAATGAAGAAGATTTAAGCATTGATATTGTAAGCAATGGTGAAAATACTAGTCTTTATCCAATCGTCAAACATAATGTGGAGCACAATGATGCATCTTCCCACAGAAAAAAGCTGCACATTGAACGAGATGTTGTGGAAGAGTTAAAACAAGATAGATCAAAAGATGGGCATTTGGCTGAAACAGCTAGAACTAGGAAGCGTTCTCGCTGGAATGTATCAGATCAATTGATTGATGAGTCCCTGGGAACCCCAGACAACGGAACTGAAGTTACTAGACCTCTAGATTCTGAAGGCAAGCACAAGAGAGGATTGAAACAACCCAGGATTGAAGTGCCGTCAACCAGCATGGCCGCTCATGTGGTTGATGAGGACGTTGATATCGAACTTAATGATGGAACTGACATTGATGAAACTGCAAATAAGGTAAATGAGAATGGAGTGGCATATAAGGTGAAGAGTGCGCCACTTATGCTTCCCCCAGCTTTGATACCTCGTAGCAATTATTCACAGTATGAGGGTAACGACGAGAATGTTGATGTGGATGGTTGA 1134 0.4056 MGGTITIHYYVSLVIPVNGRRDYLGNDLRDKLDRRFLSPRRYSPAQDARGRQTIREYSPSRSLEKKSDRRHRRNLKVSDRVEEGKLLPSGSRNSLEEQLKKVDSDINTLNNRKFQLEVYLDESVQEVDSLNSRIQELEAQLCQEDDECKRITSRIRKFVRVHNHTSKLQDELKRSQVRLQRFGDQLVSDISRIGANEEDLSIDIVSNGENTSLYPIVKHNVEHNDASSHRKKLHIERDVVEELKQDRSKDGHLAETARTRKRSRWNVSDQLIDESLGTPDNGTEVTRPLDSEGKHKRGLKQPRIEVPSTSMAAHVVDEDVDIELNDGTDIDETANKVNENGVAYKVKSAPLMLPPALIPRSNYSQYEGNDENVDVDG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01040 377 MobiDBLite consensus disorder prediction 39 73 - -
Cca04g01040 377 Coils Coil 92 112 - -
Cca04g01040 377 MobiDBLite consensus disorder prediction 287 301 - -
Cca04g01040 377 MobiDBLite consensus disorder prediction 273 301 - -
Cca04g01040 377 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 18 376 IPR045868 GO:0046872
Cca04g01040 377 Coils Coil 120 140 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01040 - - ccaj:109812761 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01040 04 11369123 11377638 Cca04g01040 04 11369123 11377638 ECH