Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01039 ATGCTTCATCGGCTTATGGCTCACCTGGTCACTCGCACTCAACTCGCCCGAGTCACGCTGCTCATTCATCGCCACAAACCTTTCCTCACAACAATTTCCTCTCTCTCTCAATTCTCCACCAAAACCAGAGCCTGGACGGCTTCCAATCGCCGTCCGCCGACGCTCCCGGATGAGCTCTCCCGAAACGTGGTGTTCCTGTCGTGCAAGTCCGCCGCCAAAGGCGGCCTTTGCCACGTCTACTTGGTCGGCGTCACTCACCTGTCCGAGGAATCAACCAGACAAGTTCAAGCTATAGTGAAATTTCTGAAACCGCAGGTTGTCTTCCTAGAATTGTGCGAGAGTCGGGTGGGACTGCTTGCCCTTAAGAATCTTAAGGTACCCACTACGGACGAAATGATTACAATGTTGAAGAAAAAACATAATATGTTTGAAGTAATTTATAGTTGTGTCCAAGCCGAGGTTGCTAGTAAGCGTGGGGTCATTCCTGGCTCTGAGTTTCGTGTGGCATATGAAGAAGCCATCAAGTATGGCGGCAGAGTAACACTTGGTGATCGCCCTATACAGCTGAAGAAAAATGATGACAGTGACAGGCCAAATCTTCTTATTCGGGTAGCGAGTAAGGAGTTTCCAACTTTAATGGAGACTGTGGTGCATGAACGAGATCGGTATATGGCCACCACATTATTACAAGTGGCAAGTCGAAATAGCTTAGTTGTAGCTGTTGTTGGAAAGGGGCATCTACAGGGAATAAAGAAGCATTGGAAGAAAACTGTTTGGGAGGATCTCATGTCAGTTCCATCTCCCAAACCAGCTGTATCTGCAATAAGAATCTTAACATCTGTCGGTGTTGCCGTGGCTGGGGTGGCTATAGTATCAGGCATCTATATTTCATGGAAGAAATGA 903 0.4773 MLHRLMAHLVTRTQLARVTLLIHRHKPFLTTISSLSQFSTKTRAWTASNRRPPTLPDELSRNVVFLSCKSAAKGGLCHVYLVGVTHLSEESTRQVQAIVKFLKPQVVFLELCESRVGLLALKNLKVPTTDEMITMLKKKHNMFEVIYSCVQAEVASKRGVIPGSEFRVAYEEAIKYGGRVTLGDRPIQLKKNDDSDRPNLLIRVASKEFPTLMETVVHERDRYMATTLLQVASRNSLVVAVVGKGHLQGIKKHWKKTVWEDLMSVPSPKPAVSAIRILTSVGVAVAGVAIVSGIYISWKK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01039 300 Pfam TraB/PrgY/gumN family 204 256 IPR002816 -
Cca04g01039 300 CDD TraB_PrgY-like 79 254 IPR046345 -
Cca04g01039 300 PANTHER PHEROMONE SHUTDOWN PROTEIN 46 189 IPR046345 -
Cca04g01039 300 PANTHER PHEROMONE SHUTDOWN PROTEIN 189 300 IPR046345 -
Cca04g01039 300 PANTHER TRAB FAMILY PROTEIN 189 300 - -
Cca04g01039 300 PANTHER TRAB FAMILY PROTEIN 46 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01039 Cca-Chr4 11363391 11367606 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01039 - - gmx:100810061 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01039 04 11363391 11367606 Cca04g01039 04 11363391 11367606 ECH