Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01020 ATGAAGAGATTGCTCTCTCGCTGTTTCcttcttcggattactgtgcttcttcttcttcttctGTTTATGAACAAGTCTCAGGGCTCTCCAATCAGAGTCGCAGAATATTCGTTTTCTATCACTACTAAGGTTGATGCGTTATCTCCTGCCATCTCTCCAAGTGCACAGCCACAGCCCTTTATTCCTCTTATAGCTCCTTCCCCGTTGAGACCTTTCACAAATAATTCTGTGCCTAAGTTATCAGGTCTTTGTTCATTGAATTTCTCAGCTGCTCAAGATATAATGACCACAACTGCTACTGATTGCTGGACTTCCTTTGCTCCATATTTGGCAAATGTTGTATGTTGTCCTCAATTTGATGCTATGCTGGTGACCCTCATAGGGCAGTCTAGCAAATACTCAGGGGTGCTAGCTTTGAACACTACTCACGCTAGTCACTGCCTTTCTGATGTCCAGAAGGTCCTGGTCAGTCAAGGAGCAAATGGGGACCTAAAAAATATATGTTCAATCCATCGAACAAATCTCACTGAAGCCTCTTGTCCTGTTGTTTTTGTTGACGAATTTGAGAGTATTGTAGACACTTCAAGACTTCTGACCGCTTGTAGAAAAATTGATCCTGTAAATGAGTGTTGTGATCAAGTTTGTCAAAATGCCATACATTATGCTGCTAGAAAAATTGCCTTGAATGATTTGTCTAATTCAGATGGAAACCATAGCTTGCCTGGGCCGACAGCTAGGATCAATGATTGTAAGAATATTGTCCGTCGTTGGCTGGCTAGTAAACTTGATCCATCCACTGCAAATAGTGTTTTTAGAGGACTCTCAAACTGCAACCTAAACAAAGAATGCCCATTGACCTTTCCAAATGTCACAAGTGTTGTGAAAGAATGCGGGAATCTCATAAATAACCAAACTGCTTGTTGCAAAGCCATCAAAAGTTATGTGTCCTATTTGCAAGAACAGAGCTTTGTAACCAATCTGCAAGCCTTGAAATGTGCTGTATCACTTGGAAAGAAATTGCAGAAAGAAAATGTCTCCGGAAATGTTTATAATCTTTGTCATATAAGCCTGAAGGACTTTTCTCTGCAAGTTGGATTGCAAGAATCTGGCTGCCTTTTGCCGAGTATGCCTTCAGATGCAGTATTTGATGAAACTACAGGGATTGGATTCATTTGTGACCTTAATGACAACATTGTAGCTCCATGGCCCACAACATCGTATCTGTTTCCATCCTCATGCAATAGATCTACAAAACTTCCATCTCTTCCTACAGCGACATCTTCACAAAATAGTCTTTACATTAATACCTTGGTTTTGCCTCTCCTCTTTACCTCTGTACTACTTCCCAGGAGGCTTCTTTAA 1362 0.3987 MKRLLSRCFLLRITVLLLLLLFMNKSQGSPIRVAEYSFSITTKVDALSPAISPSAQPQPFIPLIAPSPLRPFTNNSVPKLSGLCSLNFSAAQDIMTTTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSKYSGVLALNTTHASHCLSDVQKVLVSQGANGDLKNICSIHRTNLTEASCPVVFVDEFESIVDTSRLLTACRKIDPVNECCDQVCQNAIHYAARKIALNDLSNSDGNHSLPGPTARINDCKNIVRRWLASKLDPSTANSVFRGLSNCNLNKECPLTFPNVTSVVKECGNLINNQTACCKAIKSYVSYLQEQSFVTNLQALKCAVSLGKKLQKENVSGNVYNLCHISLKDFSLQVGLQESGCLLPSMPSDAVFDETTGIGFICDLNDNIVAPWPTTSYLFPSSCNRSTKLPSLPTATSSQNSLYINTLVLPLLFTSVLLPRRLL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01020 453 Pfam SPARK 81 234 IPR043891 -
Cca04g01020 453 PANTHER GPI-ANCHORED PROTEIN 2 449 IPR040336 -
Cca04g01020 453 PANTHER - 2 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01020 Cca-Chr4 11094772 11101104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01020 - - gmx:100780106 803.127