Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00977 ATGGAGAAAGTGAAAGAGAAAGAGAAAGTAGTAGAAAACTGGAGCGAGGCGGTGGAAGACCTTGTCGACGCCGGCGACGTGGAATCGGCGATCTCACTGCTCGAATCCGTCGTGGAAACCCTAAACCCTTCCGATTCGCCTTCGCAGCTTCAATTGGCCTCTGCTCTCTCCGACTTGGCCAACCTTTACTCCTCCAAAGGCTTCTCTCTCAAAGCCGATCACCTTCACTCTCGCGCTTCTCTCCTCAGGCATTCCACCCGCCAACGACCTCCGAAAGAGGAGGACCGAGTCGTCGAATCAACCACCGTTGCTTCTCAAGGAAGCGTTGATAAGCGTGCGGACTTGCCTGCTCCGACCTCCGCCGCTGGTGGTTCTTCCGATGAAGATTGGGAAGCAATAGCTGATCTTGAACCCGATGAGTTACTGCCTGCGGTATCCTCGGATTGTTCGTTTGGAATGTCAAATCTTAAATTGGAGAATAAGAAAAGTGGAACCCCAAAAAGGCGTGGAAGAGGGACATTCTCTTATGAGAAACAAGAGCTTTATAGTGATCAGTTAGTTGGTAGCTCGGTGGTTGATGTTGAGCGTGAAGAGACTCAATGTAGTTCGGAAGATAATAGAGATGTACGAAACTCAAAATATGGGACCAGTCATGTTCTTGTTCTGGCTGACTTTTCACCAAGTACTAGAACAACAGAGCTGGAGAAGCTTTTTGAGGACTTCAAAGATCGTGGATTTGTAATTCGCTGGGTCAATGATACTGTAGCTCTTGCAGTATTCCGAACACCTTCTGTTGCCCTTGAGGCTCTAAACAGTGTTCGCTGTTCATTCACCACGAGGATACTTGATGAAGACGATACACTTCTTAGTTCAATTAAAGCAAGAGACCTGGAACCACCACGGCAACGGCCGAAAACTTCAGCAGAAGCAGCACAGAGGCTGATTGCTCGTGGCATGGGGTTAAAATTGTCTTCTACGAGCGTTGGGTCCCAAGATTATAGAAAGCAAGAAGATGCTAGGAGAGAACGTATCGTTAACAGGCAAAAAATGAGAGATGAGGCTTGGGGAGACGATTAG 1077 0.481 MEKVKEKEKVVENWSEAVEDLVDAGDVESAISLLESVVETLNPSDSPSQLQLASALSDLANLYSSKGFSLKADHLHSRASLLRHSTRQRPPKEEDRVVESTTVASQGSVDKRADLPAPTSAAGGSSDEDWEAIADLEPDELLPAVSSDCSFGMSNLKLENKKSGTPKRRGRGTFSYEKQELYSDQLVGSSVVDVEREETQCSSEDNRDVRNSKYGTSHVLVLADFSPSTRTTELEKLFEDFKDRGFVIRWVNDTVALAVFRTPSVALEALNSVRCSFTTRILDEDDTLLSSIKARDLEPPRQRPKTSAEAAQRLIARGMGLKLSSTSVGSQDYRKQEDARRERIVNRQKMRDEAWGDD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00977 358 PANTHER OS01G0965600 PROTEIN 1 357 - -
Cca04g00977 358 MobiDBLite consensus disorder prediction 81 99 - -
Cca04g00977 358 SUPERFAMILY RNA-binding domain, RBD 211 272 IPR035979 GO:0003676
Cca04g00977 358 MobiDBLite consensus disorder prediction 333 358 - -
Cca04g00977 358 Gene3D - 215 283 IPR012677 -
Cca04g00977 358 PANTHER GROWTH INHIBITION AND DIFFERENTIATION RELATED PROTEIN 88 1 357 IPR039884 -
Cca04g00977 358 MobiDBLite consensus disorder prediction 81 128 - -
Cca04g00977 358 Coils Coil 4 24 - -
Cca04g00977 358 MobiDBLite consensus disorder prediction 326 358 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00977 - - gmx:100817151 556.214