Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00971 ATGGCGGAGAAGAAAGTGGTCATCGTAGGAGGTGGTGTTGCCGGTGCCATCCTCGCAAAAACTATACAACATCAAGCCAACGTCACCCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGAGGATTGGTGGAGCCATCTTTTGCTGAAAGGATAGTGGTCAACCATAGAGACTACTTCAAAAAAGGTTACCTTGTTGTGTCCTCTGCTGTCAACATAACTGAAACTGAAGTGTTGACTGCAGATGGCCAACAGATTGCCTATGACTATCTTGTTATTGCCACTGGCCACATAGAACCTATCCCTATTACCAGGAGTGAAAGACTTGACCAATACAAATCAGAAAATGAAAAGATCAAATCTGCAAGTTCAGTTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCCGAGATTGCTGTTGATTTTCCTGATAAGAAGGTAACTATAGTGCATAAAGGAACAAGGTTGTTGGAATACATTGGCCCAAAAGCTTCAAGGAAGACTTTGAAGTGGCTCAAATCAAAGAAAGTTGATGTGAAACTAGAGCAATCAGTTGAGTTGAACTCCTCCTCCACAGAAGGAAATAAGACATATCAAACTTCAGGTGGAGAGACTATAGAAGCAGATACTCATTTTCTATGCATAGGGAAACCACTTGGCTCAGCATGGCTTCGAGAAACTCTTCTAAAGGATGACTTGGATGCTGATGGAAGGATCAAGGTGGATGAACACTTGAGAGTAAAGGGCAGGAGCAACATTTTTGCAATTGGAGATATTATAGATGTTCAAGAAATCAAACAAGGGGTGTATGCACAAGGTCATGCTCAATTGGTTGCCAAGAACCTGAAGCTATTGATAGAGGGAGGAGGCAAAAAGTTGGGAACATACAAGGCACAACCACCAATTTCTATAGTTTCACTTGGAAGAAAACATGGAGTTGCACAGTTCCCATTCATAACTGTGCTCGGAAGGTTTCCTGGCATGATCAAGTCAGGAGATTTGTTTGTGGGGAAAACGAGGAAGGATTTAGGACTCGAACCTAATGTTAAAAAATCTTAA 1080 0.4204 MAEKKVVIVGGGVAGAILAKTIQHQANVTLIDPKEYFEIPWASLRGLVEPSFAERIVVNHRDYFKKGYLVVSSAVNITETEVLTADGQQIAYDYLVIATGHIEPIPITRSERLDQYKSENEKIKSASSVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGTRLLEYIGPKASRKTLKWLKSKKVDVKLEQSVELNSSSTEGNKTYQTSGGETIEADTHFLCIGKPLGSAWLRETLLKDDLDADGRIKVDEHLRVKGRSNIFAIGDIIDVQEIKQGVYAQGHAQLVAKNLKLLIEGGGKKLGTYKAQPPISIVSLGRKHGVAQFPFITVLGRFPGMIKSGDLFVGKTRKDLGLEPNVKKS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00971 359 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 281 IPR023753 GO:0016491
Cca04g00971 359 Gene3D - 1 343 - -
Cca04g00971 359 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 359 - -
Cca04g00971 359 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 359 - -
Cca04g00971 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Cca04g00971 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Cca04g00971 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 245 267 - -
Cca04g00971 359 SUPERFAMILY FAD/NAD(P)-binding domain 1 289 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00971 Cca-Chr4 10321326 10324952 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00971 K22745 - gmx:100817682 598.971