Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00969 ATGGAAAAAGAAGGGAAGAAAGTGGTGATCATAGGAGGTGGTATTGCAGGTTCCCTCGTCGCCAAAAATCTACAATCGCATGCCCATGTCACCCTCATTGATCCGAAGGAATATTTTGAGATTACATGGGCAAGTTTGAGGTCAATGGTTCAACCATCTTTTGCAGAGAGGTCTTTGATCAATCATAGAGATTACCTTACCCATGGTGACATTGTCACATCCTATGCTGTCAATATTACAGAAACAGAAGTGTGGACTGCAGAGGGTCGTCGAATAAACTATGACTATCTTATCATCGCAACTGGCCATGCAGATCATGTTCCTAAAAGCAGACCTGAAAGACTTGATCAATTCAAAGAAGAGAATGAAAAGATAAAATCGGCTGATTCTATTCTAATTGTTGGAGGAGGTCCAACTGGCGTGGAACTTGCTGGAGAAATAGCTATTGATTTTCCAGACAAGAAGATTACACTAGTGCACAAAGGACCAAGGTTGTTGGATTTCGTAGGAACAAATGCTGCAGACAAGACTCTAAAATGGTTGGAATCAAAGAATGTCGTTGTGAAATTAGAGCAATCAGTTGACTTAAACGCATTTAGAGATGGATTGAAGATATATCAAACATCAAATGGAGAGAACATTGTCGCAGATTGTCATTTCTTATGTTTAGGGAAACCACTTGGTTCAACATGGCTTAATGAAACTGTGTTGAAGAATGACTTGGATTTTCTAGGAAGGATTAAGGTAGATGAACAATTGAGAGTCAAGGGTTGGAGCAACATTTTTGCAATTGGAGATATTACAGATGTTCCAGAAATCAAGCAAGGGTTTGCAGCACAACAACATGCTGAAGTGGTTGCAAGGAACTTGAAGGTGATGATTGAGGGTGGCAAAAAACAATGTAATCGATGTGGGACGGAAACTTACAAGCCACAATTAGAAATGGCAATAGTTTCACTTGGGAGGAAAGAAGCAGTGGCACAGTTCCCATTCTTGACAATAATTGGAAGATTTCCTGGATACATCAAATCGGGAGATTTGTTTGTAGGTAGAACAAGAAAACAAATGGGACTCAACCCTAATATTTGA 1089 0.3976 MEKEGKKVVIIGGGIAGSLVAKNLQSHAHVTLIDPKEYFEITWASLRSMVQPSFAERSLINHRDYLTHGDIVTSYAVNITETEVWTAEGRRINYDYLIIATGHADHVPKSRPERLDQFKEENEKIKSADSILIVGGGPTGVELAGEIAIDFPDKKITLVHKGPRLLDFVGTNAADKTLKWLESKNVVVKLEQSVDLNAFRDGLKIYQTSNGENIVADCHFLCLGKPLGSTWLNETVLKNDLDFLGRIKVDEQLRVKGWSNIFAIGDITDVPEIKQGFAAQQHAEVVARNLKVMIEGGKKQCNRCGTETYKPQLEMAIVSLGRKEAVAQFPFLTIIGRFPGYIKSGDLFVGRTRKQMGLNPNI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00969 362 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 282 IPR023753 GO:0016491
Cca04g00969 362 PANTHER APOPTOSIS-INDUCING FACTOR 1 5 362 - -
Cca04g00969 362 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 5 362 - -
Cca04g00969 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Cca04g00969 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 94 112 - -
Cca04g00969 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Cca04g00969 362 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Cca04g00969 362 Gene3D - 4 349 - -
Cca04g00969 362 SUPERFAMILY FAD/NAD(P)-binding domain 126 224 IPR036188 -
Cca04g00969 362 SUPERFAMILY FAD/NAD(P)-binding domain 7 290 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00969 Cca-Chr4 10307910 10310363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00969 8 274 EF-hand Containing Proteins AT4G28220 22.989 2.93e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00969 K22745 - gmx:100813439 566.614