Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00959 ATGACGACATCTCTGCTACTCCCATCGCCTTCTTGTGCTTCGTTACTGAGCAAAGGGACTAATAGACTTTGCACTCCTGCTTCATTTCACACACTTAAATCCCATGTTAAGGGCTTCAGAGTGAGAGCCCTTAGAGAGAAAACAGAGGAAATTGAAAGCCCTTCGCCTGAGGAAGTTACAAAGAAGTATGGCCTTGAAGCTGGTCTTTGGAAGATTTTCAGCTCCAAAGAGGAAGGAAATGTTGAGGGCAATTCTGACCAACAGAAATCGAAGGGTGATCAAGCCAAGGAATTGCTTGCAAAATATGGAGGAGCATACTTGGCAACCTCCATTACTCTGTCATTGATCTCTTTCGCACTTTGTTATGCATTGATCAGCGCTGGAATTGATGTCCAAAGTTTACTGCAGAAGGTTGGAATCTCAACTGACGCGACTGGCGAAAAAGTTGGTACCTTTGCTTTGGCATATGCTGCACATAAAGCTGCATCTCCTATTAGGTTTCCACCCACAGTAGCTCTTACCCCAATTGTGGCTGGTTGGATTGGAAAGAAGGTGGAGAAAGATAATTAG 570 0.4439 MTTSLLLPSPSCASLLSKGTNRLCTPASFHTLKSHVKGFRVRALREKTEEIESPSPEEVTKKYGLEAGLWKIFSSKEEGNVEGNSDQQKSKGDQAKELLAKYGGAYLATSITLSLISFALCYALISAGIDVQSLLQKVGISTDATGEKVGTFALAYAAHKAASPIRFPPTVALTPIVAGWIGKKVEKDN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00959 189 PANTHER OJ991214_12.13 PROTEIN 51 187 - -
Cca04g00959 189 PANTHER UNCHARACTERIZED 51 187 IPR045866 -
Cca04g00959 189 Pfam FAM210A/B-like domain 94 175 IPR009688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00959 Cca-Chr4 10209646 10211313 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00959 - - gmx:100820351 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00959 04 10209646 10211313 Cca04g00959 04 10209646 10211313 ECH