Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00949 ATGGCACTCGTAACAACAAACCCAACCATGAACGAGGGGCCTCTGTTCGCTGAGGTTGACATGGGTTCCGATTTCAACGCCCCCACTGTCCGAGCCACCGTTGTTCAAGCCTCCACCATCTTCTACGACACTCCAGCCACTTTAGATAAAGCTGAGAGGTTCTTGGCTGAAGCTGCGGGCTATGGATCCCAGCTTGTGGTGTTTCCAGAAGCATTTGTGGGTGGCTATCCGCGTGGTTCAACTTTTGGTGTTTCTATTGGAAATCGCACGCCCAAGGGTAGAGAAGAGTTCCGCAGGTATCATTCTGCAGCCATTGATGTGCCTGGTCCTGAAGTGGATAGATTGGCAGCAATGGCAGGGAAGTATAAAGTATATTTAGTGATGGGTGTGATAGAGAGGGATGGCTACACTCTTTATTGCACAGTTCTCTTCTTTGATTCTCAAGGTCGTTATCTAGGAAAGCACAGGAAAATCATGCCAACTGCATTGGAGCGGGTTATCTGGGGGTTTGGTGATGGATCAACCATTCCAGTCTTTGAAACTCCCATTGGAAAACTAGGTGCTGCCATTTGTTGGGAGAACAGAATGCCACTATTAAGGACTGCAATGTATGCTAAAGGTGTGGAGATATATTGTGCTCCTACAGCTGATTCCAGGGAGGTGTGGCAAGCATCAATGACCCATATTGCTCTTGAAGGTGGATGTTTTGTTTTGTCAGCTAACCAGTTCTGTAGGAGAAAGGATTACCCACCCCCTCCAGAGTATGTTTTTGCTGGCATAGAAGAGGATCTGACACCAGATTCTGTTGTATGTGCTGGGGGTAGTGCCATTATATCACCATCCGGGGCTGTTCTGGCTGGACCAAACTATGATGGGGAGGCACTAATCTCAGCAGATCTTGATCTTGGAGAAATAGCAAGAGCTAAGTTCGATTTTGATGTAGTTGGGCACTATTCAAGGCCTGAAGTACTTAGCTTGATTGTGAAGGACCATCCAACGAACCCCGTTACTTTTGCATCAACATCGACAAAAACTGAAGACAAGACCAAGTAG 1053 0.471 MALVTTNPTMNEGPLFAEVDMGSDFNAPTVRATVVQASTIFYDTPATLDKAERFLAEAAGYGSQLVVFPEAFVGGYPRGSTFGVSIGNRTPKGREEFRRYHSAAIDVPGPEVDRLAAMAGKYKVYLVMGVIERDGYTLYCTVLFFDSQGRYLGKHRKIMPTALERVIWGFGDGSTIPVFETPIGKLGAAICWENRMPLLRTAMYAKGVEIYCAPTADSREVWQASMTHIALEGGCFVLSANQFCRRKDYPPPPEYVFAGIEEDLTPDSVVCAGGSAIISPSGAVLAGPNYDGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLIVKDHPTNPVTFASTSTKTEDKTK 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00949 350 SUPERFAMILY Carbon-nitrogen hydrolase 28 329 IPR036526 -
Cca04g00949 350 ProSitePatterns Nitrilases / cyanide hydratase signature 1. 62 77 IPR000132 GO:0003824
Cca04g00949 350 Gene3D - 19 314 IPR036526 -
Cca04g00949 350 CDD nitrilases_CHs 30 328 IPR044149 GO:0003824
Cca04g00949 350 Pfam Carbon-nitrogen hydrolase 31 309 IPR003010 GO:0006807
Cca04g00949 350 ProSitePatterns Nitrilases / cyanide hydratase active site signature. 187 200 IPR000132 GO:0003824
Cca04g00949 350 PANTHER NITRILASE 14 345 - -
Cca04g00949 350 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 30 302 IPR003010 GO:0006807
Cca04g00949 350 PANTHER NITRILASE 14 345 IPR044149 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00949 Cca-Chr4 10064420 10068069 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00949 K13035 - gmx:100778110 685.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00949 04 10064420 10068069 Cca04g00949 04 10064420 10068069 ECH