Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00948 ATGCCCTCGTGTCATCacaccaacaccaacaaccacctcaacctcaacGAAGGTCTCACACAGAACCACAACAAGACAAGGAAACGAGGTTGTTCCTCTTCCTCCTCATCCTCTTTGGTACGAAGATACCGTTTCAAGAGAGCCATTTTGGTTGGGAAAAAAGGAGGGTCTAGCACCTCAGTTCCTTTGTGGAAGACTAGGACGAGTTCTCCTTCTCTTCCTGCACAACACACAACGAAGCCTTTGCATTCTTGTGCCTCCATGTTGCCCTCCAAGGACAAGGAACTTTCCGTGTCAGCGAGGAAACTCGCTGCTACGCTGTGGGAAATCAATGATTTGCCTCCTTCGAGGGTCAAGAAGGAATTCGAGGTTGACCAACTGAGAGCGTGCAAGGAGAAGGTTCGAGGCAGAGAGAAAGGTGTCAGATCGGGCTTGTTGAGGCCACAGATGTCAGATCCATCGCATAGTCCTGCCTCGGAGAGAATGAAGGGGCTTGAAGGGGATAGCTGCAAGAGAAGAGTGTCGGGGTTTTCCCATCAACTTCTATCGGGTGATTACTATTTGGATGCTCTTGATGCTCATATCAGTGCCCATTTTATTGAGGAGGTGGAAAATCAGTTAAGAAATGAGAAGAATCGTGGGAAATGCACGGGTGGTGTTAAGAACCGTCTGAAGGAAGCTAGAAGTGGCCTATCTACATCAAAGAAGCTTCTAAAGGTGTTGAATCAAATGTGCCTTAGAGAGCAGCAAGCATCAAGCATGCCTCTTGTTTTGGCTCTGGGGAGTGAGCTTGATAGGGTGTGCCACCAAATTGATCAACTGATCCAAGAACAGCGCTCGAACTCGAACCAGAACGATATAGAGCATGTCATGAAGCATTTTGCAGAAGAGAAGGCTGCTTGGAAAAGAAGAGAACGAGAAAGGGTTCATGATGCCATAAAACATGTGGCAGAAGAGCTTGCAGTGGAGAAGAAGTTGAGAAGGCAAACTGAACGGTTGAATAAGAAGATTGCCAAAGAAATGGCTAGTGTGAAAGCTTCTCATTTGAAAGCTTCCAAAGAGCTTGAAAGGGAGAAGCGCGCAAAGGAGATTTTGGAGCAAATATGTGATGAACTAGCCAGAGGCATTGGTGAAGATAGAGCACAGGTGGAGGAACTGAAAAGGGAATCGGCTAAGGTTCGCGAGGAGGTGGAGAAGGAAAGGGAAATGCTTCAGTTAGCCGATGTTTTGCGCGAGGAGAGAGTCCAGATGAAGCTTTCTGAGGCTAAGTATCAGTTTGAGGAGAAAAATGCTTTTCTGGAGAAGCTCAGAAATGAGCTTGAGAACTACATGAGGACTAAAGATGGGCAAAATGAGGATGTTTCTCCAGAATGTAAAAAGATCAAGGATCTTGAGTCTTATTTCAATAATGTCTGTAGGGGATTCCAGAATGCAGAGAAAGAGGATGATTCGGATGTTGAAAATGATGTACAACATGAAGGAGATGATGATTCAGATGATAGTGATCTCCATTCCATTGAATTAAACATGGACAATGAGAGTAAAGGCTACAAGTGGGGTTATGCTTGTGAAAATGCTGCTCAAGATAAGAGGTTTTCATTTGACAAAGGGAGTATAGGGAGGAAGTCTTTCTCTGAGAAAATTCAGTGGGGAAGTATTTGCTTCAACAAGGGAGCTTCAAGTGGTAGGAAGAGGGATTTTTCTATAAATATTCAGGAATTTTCTGATCATTTTGATCCTGATAGGTCAATTGAATTTCTCTCACAAGCAAGGATACAAGATGATAAGGATGAAACTCAGAGCAATAGGTCTACCAAGGGGCTCCAAGACTCTATGTCATGTGCCAATTCTGATAAGAGAAATGGTCTACTATTAACTTTGCAGTGTGCTAGTAGAGAAGCGGGGGAAAATGCTCTTGCCCTGGAGGGTGACAATGCAGGAAAAAAAAATGGATGTTAA 1959 0.4359 MPSCHHTNTNNHLNLNEGLTQNHNKTRKRGCSSSSSSSLVRRYRFKRAILVGKKGGSSTSVPLWKTRTSSPSLPAQHTTKPLHSCASMLPSKDKELSVSARKLAATLWEINDLPPSRVKKEFEVDQLRACKEKVRGREKGVRSGLLRPQMSDPSHSPASERMKGLEGDSCKRRVSGFSHQLLSGDYYLDALDAHISAHFIEEVENQLRNEKNRGKCTGGVKNRLKEARSGLSTSKKLLKVLNQMCLREQQASSMPLVLALGSELDRVCHQIDQLIQEQRSNSNQNDIEHVMKHFAEEKAAWKRRERERVHDAIKHVAEELAVEKKLRRQTERLNKKIAKEMASVKASHLKASKELEREKRAKEILEQICDELARGIGEDRAQVEELKRESAKVREEVEKEREMLQLADVLREERVQMKLSEAKYQFEEKNAFLEKLRNELENYMRTKDGQNEDVSPECKKIKDLESYFNNVCRGFQNAEKEDDSDVENDVQHEGDDDSDDSDLHSIELNMDNESKGYKWGYACENAAQDKRFSFDKGSIGRKSFSEKIQWGSICFNKGASSGRKRDFSINIQEFSDHFDPDRSIEFLSQARIQDDKDETQSNRSTKGLQDSMSCANSDKRNGLLLTLQCASREAGENALALEGDNAGKKNGC 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00948 652 PANTHER PLANT/F24K9-26 PROTEIN 22 614 - -
Cca04g00948 652 MobiDBLite consensus disorder prediction 1 35 - -
Cca04g00948 652 MobiDBLite consensus disorder prediction 590 614 - -
Cca04g00948 652 Coils Coil 369 403 - -
Cca04g00948 652 Coils Coil 426 453 - -
Cca04g00948 652 MobiDBLite consensus disorder prediction 478 503 - -
Cca04g00948 652 MobiDBLite consensus disorder prediction 55 81 - -
Cca04g00948 652 MobiDBLite consensus disorder prediction 138 167 - -
Cca04g00948 652 PANTHER GB|AAF24581.1 22 614 IPR043424 -
Cca04g00948 652 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00948 Cca-Chr4 10059940 10062555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00948 - - gmx:100780458 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00948 04 10059940 10062555 Cca04g00948 04 10059940 10062555 ECH