Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00933 ATGGAAAGTGGAGGGCAAAGCGGTAAAACGCACGTGGTGATAAGAGAAGGGCATTATCGTAAAAGCCTTCCCCTCCCTCTTCCACTTCTTAAGCATCCTCATGACAGAAATGAGAGAGGCATGAGAATGGGGAAAAGGGTAAAATGGAGCTGGAGCTCGGCGATAATCGGagcagcatcagcggtagcagcaacagcCCTAATATCAGCAAAACCAAAGGACCCAACGTTCCACCTCATATCCATTAACTTCACCTCCCTCAAACTCAACCTCCCTCTCCTCGACGCCGAGCTCCTCCTCACCGTCCACGTCACCAACCCTAACATCGCCCCCATCCACTACTCCTCCGCCGCCATGTCCATCTTCTACCACGGCTCCCTCCTCGGCTCCGCTCAGGTCCAAGCCGGCTCCCAGCCCCCCCGCTCCTGCCAGCTCCTCCGCCTCCCCGCCCGCCTCCACGCGCTCCAGCTCGCGCACCACGCCACGCGCTTCGCCCACGACGTCGCCAGCCGCGAGATGGTTCTCGACGCCGCCGTGGACATTGCCGGCACCGCTAGGGTCGCCTGGAAAACACCTCCCAGCTTCAAATCTTCACCGCGGCTTAGGACTCTTTATgtatgctatggattataa 633 0.5498 MESGGQSGKTHVVIREGHYRKSLPLPLPLLKHPHDRNERGMRMGKRVKWSWSSAIIGAASAVAATALISAKPKDPTFHLISINFTSLKLNLPLLDAELLLTVHVTNPNIAPIHYSSAAMSIFYHGSLLGSAQVQAGSQPPRSCQLLRLPARLHALQLAHHATRFAHDVASREMVLDAAVDIAGTARVAWKTPPSFKSSPRLRTLYVCYGL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00933 210 SUPERFAMILY LEA14-like 65 196 - -
Cca04g00933 210 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 34 197 - -
Cca04g00933 210 SMART why 82 198 IPR013990 GO:0009269
Cca04g00933 210 Pfam Late embryogenesis abundant protein 101 190 IPR004864 -
Cca04g00933 210 Gene3D - 57 198 - -
Cca04g00933 210 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 34 197 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00933 - - gmx:100782945 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00933 04 9913391 9914422 Cca04g00933 04 9913391 9914422 ECH