Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00920 ATGGCTAAACCCCGCCACCtcattttccttttttttctttttcttcttcttcttctctgtgccactctacaatcttcttcagcttcatcctcCGATCACCTCTACGATGTTGGAGATGTTGTCCCATTCTTTGTCAACAAAGTAGGACCCTTCAACAACCCCAGTGAGACATACGAGTTCTATGATTTGCCATTCTGCACCCCAGACCCAATTGTCAGAAAGAAAGAGTCCCTTGGGGAGGTTCTTAATGGTGACCGTTTGAGCAATGCAAAGTATGAGTTCAAGTTCAGGGAGGAGAAGATTGATGAGACATTGTGCCCTAAGAAGCTTACAATTGACCAAGTTGCAATCTTGAGGCAAGCTATAAGCCGCGATTTTTACTTCCAGTTTTACCTGGATGATCTTCCATTCTGGGGGTTCATTGGGAAACTTGAAGAGGATGGATGGACTCCTGGTGGAGGAGGACCGAACTATTACCTTTTTACTCATGTTCAATTTGATATTCTTTACAATGGGAATCAAATCATACAAGTAAATGCATTTGGCGATCCGAATCGTGCTGTAGACATTACTAGTGATGTTGGTGTTGATGTTAAGTTCACCTATTCTGTTATCTGGAATGCCACTAAAGTACGTTTTGAGAACAGGATGGATAGATACTCTAGAGCTTCGTTGATGCCGGTTCATCAGCAAATTCATTGGTTTTCATTTGTTAACTCAATTGCCATCATTCTTCTTTTGATTGGTTTGCTTGCCCTGCTTTATATGCGGCATCTGGGAAGTGATTTGAAAAAGTATTCTAATGCAAATGAGGAAGATAAGGAGGTTGGTTGGAAGTCCCTCCATGGCGATGTATTCAGACCTCCTTCAAACTCGGCCTTACTTTTTGCTGTTGTGGGAACTGGTACCCAATTGCTAATCTTGCTTTGTGTCTTGCTGTTTCTAGCACTTATTGGCACCCTCTATCCCTACAACAGAGGAGGACTGTTAAATTGGCTTGTCTTGCTATATGCTCTCTCATCTGTTTTTGCTGGGTACACTGCAGCATCCTTCTATGGCCAGTTTGCCGAGAATGGATGGGAAAAGACTGTTAGTCTAGCAGGGATTCTTTACACTGGACCAGTGTTTGTTGCAGCTTCTATCCTCAACATTGTTGCAATATCTTACAGGGCTACAACTGGATTCCCATTTGGCTCCATTGTTGTCGTTCTTGTTTTATTCACATTTCTTGCCATCCCATTGCTTGCATTTGGTGGTGTGATTGGATATCGTTTTAGATCTAAATTTCAAATCCCCTCTGGTACAAAGAGACATTCGAGAGATACTCAACTGCTTGCTTGGTACAGGAGAACGCCGTTTCTAATGTTTCTTGGGGGACTTGTGCCATTCAGTGCAATTGTACTGCAACTACACCAGGTGTATGCTAGTATGTGGGGCTACAAAATATACACTCTTCCTAGCATTTTGTTTGCCACATTCATACCAGTCATTGTGATCATTGCACTTGTTAGTATTGGTTTGACATACATTCAACTATCCGTTGAAGACCATGAGTGGTGGTGGAGATCAGTGCTGTGTGGTGGCTCAACAGCCATTTTCATGTTTGGATATTGTATCTACTTCTACGTGAGATCAAATATGAGTGGATTCTTGCAGCTATCCTTCTTTATTGGCTATAATGCATGCCTATGCTACGCTTTCTTCCTAATATTTGGTGCCATTAGTTTCCGAGTTTCATTTCTATTCGTTCGCCATATTTATGATGATGTTAAAAGAGAGTGA 1782 0.4029 MAKPRHLIFLFFLFLLLLLCATLQSSSASSSDHLYDVGDVVPFFVNKVGPFNNPSETYEFYDLPFCTPDPIVRKKESLGEVLNGDRLSNAKYEFKFREEKIDETLCPKKLTIDQVAILRQAISRDFYFQFYLDDLPFWGFIGKLEEDGWTPGGGGPNYYLFTHVQFDILYNGNQIIQVNAFGDPNRAVDITSDVGVDVKFTYSVIWNATKVRFENRMDRYSRASLMPVHQQIHWFSFVNSIAIILLLIGLLALLYMRHLGSDLKKYSNANEEDKEVGWKSLHGDVFRPPSNSALLFAVVGTGTQLLILLCVLLFLALIGTLYPYNRGGLLNWLVLLYALSSVFAGYTAASFYGQFAENGWEKTVSLAGILYTGPVFVAASILNIVAISYRATTGFPFGSIVVVLVLFTFLAIPLLAFGGVIGYRFRSKFQIPSGTKRHSRDTQLLAWYRRTPFLMFLGGLVPFSAIVLQLHQVYASMWGYKIYTLPSILFATFIPVIVIIALVSIGLTYIQLSVEDHEWWWRSVLCGGSTAIFMFGYCIYFYVRSNMSGFLQLSFFIGYNACLCYAFFLIFGAISFRVSFLFVRHIYDDVKRE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00920 593 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 14 592 - -
Cca04g00920 593 Pfam Endomembrane protein 70 57 550 IPR004240 GO:0016021
Cca04g00920 593 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 14 592 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00920 Cca-Chr4 9801941 9806253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00920 13 593 Miscellaneous Gene Families AT2G01970 48.205 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00920 K17085 - gmx:100818419 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00920 04 9801941 9806253 Cca04g00920 04 9801941 9806253 ECH