LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca04g00917	ATGTTGAGTTCTGGGAGTAACTTGAACAGTAGCAGCAGCAGCGGGATAACTTCTTCGGATATGCCACCCTTGCCCCAGTGTTTGCCACTAGATTCAATTACAGTAGGCAATAGAAAATATACAGGAGAGCTAAGGAGGGTTCTTGGTGTCACTGCTGGAAACACATCTGAAGACCATTCTTTTGGTGGTTCACATCCTAAACCCATGGCTCCAGGAGCCTCAGGTGAATTAAAGCACTTCAAAGAAAGTGTACAAGATGCTTCCAGAAAGGCGAGGGATAGATCAAAAATGCTTGGGGAATCTTTGTCTAAACTGGAGAAGTACGAGGCATTAAACATAAAGAAGCGGCAAAGGGCGGATTTATCAAGTGATAGGGGAGGTGGAGTAAACTTGACGAAGATGGGTAACCAGATTCACAAAACTCCTAATGATAATCTAACTCAGAGATCAGAAGCAAAGGCCTCAAATTCAATGCTGAACAAGCGAATTCGTACATCAGTGGTAGATGTGCGGGACGAAAGTAGGTCTCCTGCTATTGGAAGGCCACGGATGGTCACAGAAAAGGATGGAAATCTGATTCAGACACTTGGTGGGAGCTCTGTTCGAAATGAAGAGAAAACACGCAGATTACTTGCTGGTGCTGGTGGTGAAGGTTTGGATAACAAAATAAAGAAGAAGAGGTCTGTTGGAACTGTAGGTAACAGACTTATAACTGGTGAAAGGGATGTAAAACGAACTGCTCTTCCAAAGGCAAATGCTGATCTGAAGACACGACTTTATGATGCTCAAGGTTTCAGATTGAAGCCACTTTCTGGATCTGGTGGGAACAAGTCTGAGGGCTCTTCAGAGCTTACTAATACACGCATGATGCTTGCAAGTGAGCAAGGTGCTTCTCTTCACAGGGAACACATAGCTGAGCAGAGAGTTATGACAAAAGGAAACAACAGGGCAAACAGTCAGGAGGACCCAGCAAGCAGCCCTAACACGGTAATAAGAAACAAAGCATCTCGGGCACCAAGAACAGGTTCAGTTAGTGCACTAGAATCATCCAACATTCAACCTTCTTCTACAACTTTTCAAGGTTCTATGAATTCAATGACCCAGTGGTGTGGTCAGAGGCCACCAAAAAATTCACGCTCACGAAGAGTTAAAGTAGTTTCTCCTGCCTCACGGAATCTCGAAGTACAGGTCTCATCCGAAGGCTGTCTAACTTCTGATTTCAGTCTTAAAGCTTCTTCTGCTGGCAACAATGGATTTCAACCAGCAAGCAGTGTAGACAACAGCACTCCAAAATATAAAAGGCCACATGATGATATTTCATCTCCCTTTGGATTATCTGAAAGTGAAGAATCTGGAGCTGGGGAAAACAAAATAAAAGAGAAAGGAGTGAATGGCAGTGACTTTTCTATAGCTGCAGATAAGGCTGGGACTTCTATGTTTCAAATGAGGAAGAATAAGATATCAACAGATGAATCTGGAGATATGGTGCAGAAACAAGGAAGAAGTGGTAGGAATTTTTCATTAACAAGGCCAGGACTCCCTTCTGGGAGGGAGAAGCCAGAGAATGTACCAATAATGAAGCCAGTACAGGACATGAAGCCGAATGATAAGAGTAAAGCCAAATATGGACGCCCTCCTTCAAAAAAGCAAAAAGAGCGTAAAATTTTGACTCGTGTACGGAAACAACTGAACATTGGTTCTTCTGAATTTGGAGGTGAATCTGATGAGGATCGTGAAGAATTATATAAAGCTGCAAATGCTGCTCGTAATGCTAGCAAGCTTGCTTGTTCGGGTCCATTTTGGAATAAAATGGAGTCTATTTTTGCTTCTATCAGCTTGGATGATGCATCTTACTTGAAGCAACAGCTCAATATTTCTGAGGAGTTTGAGAAAAGTTTTTCTCATATGTTTGGCATTGATCATGATCTGTTGAGTGTTGTTATAAATAACAAGACCACTGGCTCAGAGGAAGGCAAGAGAAGTCACTGTGATGAAGAATCAACTAAGTTTGATGCTTTAGGTGGAAAGAAGGACACAGAAAGACTGGACAAGGTTACCCCACTATTCCAAAGACTTCTTTGTGCTCTAATTGAAGAGGATGAAAGTGAAGAATCATATCACCAAAGTGATGCAAAGAATATATCTCGACAATGTGCTAGTGATGATTCTCACTGTGGTTCTTGTAATCAAATTGATTTTGAACCCAAAGATCGTGATAGAATGGATTCTGAAGTTGAATCAGAGGTAGATCTTCCAATTCAGAAGAATTGCATGTTGGATAGACTGTCTTGTGAAAAGAGCACCACATCCAACACATTTAGGTACCCAAACACATCCAGTTCTTTACAAAGCACTGGAGTTTGGCAGGACGACGAAGAATTTTGCCTTTCGGATATCACACACACCAGTGAAATATGTTCAAATGATGTTGATCAACTGCAGCCTGCTGAATTAAGTGTTCTTAGCTTTCCTTCTCCTGATGGCCAGTATCAGCTGATGTCACTGGATGACAGACTGCTGCTGGAGTTGCAAAGCATTGGGTTATATCCTGAAATATTGCCTGACTTGGCTGAGGAAGATGAAGCTATAAATCAAGACATTGTGAAACTTGAGAAAGCATTGTACGAACAGAATGGGAGGAAGAAGAATAACTTGGACAAAATTGATAGTGCTGTTCAAGAAGGGAGGGACATGGAAAGGCAGAAGATTGAACAAGCTGCGTTTGACCATCTTATTGAAATGGCTTACAGAAAGAGATTGGCATGCCGAGGAAGCAAACATTCAAAAGGTGCAGTTCACAGGGTGTCTAAACAAGTTGCTTTGGCCTTTCTCAAACGGACTCTTGGAAGATGTAAAAGATATGAAGAAGCTGGCATTAACTGCTTTAGTGACCCTACCCTGCAAAATATAATGTTTGCTCCACCTTCACGTGAGAATGATGCACAACCTGCTGAATGCATGGTCTCTGGGACAGCCAGTAATACATGTAACAAAGCTCCCCATCAAATTGAGGCCAGAAAATCAGGTGCAGTTTCTAGTGCTTCGGAGAAATACGATTGCCATAGAGATTATGCAGACAGGGGATTGGTTGATTCTTTTCAAGGTTCAATTCAGTCATCAGAGCAAGCATCATCCAAGAATGGGTCCGTGTTTATCAAAGAAAAGAAGAGGGAAATGCTGGTCAACGGTTCTTCCTCTAGAGCATCAAATCTAGAAGGTGCTGTTCATGGTGGAGTGAGGGGAAAGAGAAGTGAGAGAGAGAGGAATCAGAGCAGACAAAATTCTATTGGTAGAGCTGGACGCATGTCCCTGGACAGTAGCCCAAATGAGAACAAACCAAAAGCCAAGAAGCAAAAGACTAGTGCTAGTGGACATGATAGGTATAAGGAAACAAAGGAAGAATCTGCTGTGGCTGATACAATCAATAATAGTAGCAAAAATGGGGCAACATTATCTGGTAACCAGGACAATTCTCAAATAAATGAGTCCAATGACTTCGGGAATTTGCCACTACCTGATTTAAGTTCAATTGAAGAATTTGGTGGGGCGCATGATCTTAGTTCTTGGTTGAACTTTGATGAGGATGGTTTGCAAGACCATGATTCTATTGGCCTTGAAATACCAATGGATGACCTATCAGATTTAAATATGCTTATGTGA	3660	0.4199	MLSSGSNLNSSSSSGITSSDMPPLPQCLPLDSITVGNRKYTGELRRVLGVTAGNTSEDHSFGGSHPKPMAPGASGELKHFKESVQDASRKARDRSKMLGESLSKLEKYEALNIKKRQRADLSSDRGGGVNLTKMGNQIHKTPNDNLTQRSEAKASNSMLNKRIRTSVVDVRDESRSPAIGRPRMVTEKDGNLIQTLGGSSVRNEEKTRRLLAGAGGEGLDNKIKKKRSVGTVGNRLITGERDVKRTALPKANADLKTRLYDAQGFRLKPLSGSGGNKSEGSSELTNTRMMLASEQGASLHREHIAEQRVMTKGNNRANSQEDPASSPNTVIRNKASRAPRTGSVSALESSNIQPSSTTFQGSMNSMTQWCGQRPPKNSRSRRVKVVSPASRNLEVQVSSEGCLTSDFSLKASSAGNNGFQPASSVDNSTPKYKRPHDDISSPFGLSESEESGAGENKIKEKGVNGSDFSIAADKAGTSMFQMRKNKISTDESGDMVQKQGRSGRNFSLTRPGLPSGREKPENVPIMKPVQDMKPNDKSKAKYGRPPSKKQKERKILTRVRKQLNIGSSEFGGESDEDREELYKAANAARNASKLACSGPFWNKMESIFASISLDDASYLKQQLNISEEFEKSFSHMFGIDHDLLSVVINNKTTGSEEGKRSHCDEESTKFDALGGKKDTERLDKVTPLFQRLLCALIEEDESEESYHQSDAKNISRQCASDDSHCGSCNQIDFEPKDRDRMDSEVESEVDLPIQKNCMLDRLSCEKSTTSNTFRYPNTSSSLQSTGVWQDDEEFCLSDITHTSEICSNDVDQLQPAELSVLSFPSPDGQYQLMSLDDRLLLELQSIGLYPEILPDLAEEDEAINQDIVKLEKALYEQNGRKKNNLDKIDSAVQEGRDMERQKIEQAAFDHLIEMAYRKRLACRGSKHSKGAVHRVSKQVALAFLKRTLGRCKRYEEAGINCFSDPTLQNIMFAPPSRENDAQPAECMVSGTASNTCNKAPHQIEARKSGAVSSASEKYDCHRDYADRGLVDSFQGSIQSSEQASSKNGSVFIKEKKREMLVNGSSSRASNLEGAVHGGVRGKRSERERNQSRQNSIGRAGRMSLDSSPNENKPKAKKQKTSASGHDRYKETKEESAVADTINNSSKNGATLSGNQDNSQINESNDFGNLPLPDLSSIEEFGGAHDLSSWLNFDEDGLQDHDSIGLEIPMDDLSDLNMLM	1219

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	134	156	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1110	1136	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	414	462	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1078	1092	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1093	1109	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	55	75	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	311	375	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	532	552	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	486	552	-	-
	Cca04g00917	1219	PANTHER	OS05G0107300 PROTEIN	1	1219	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1137	1170	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1	24	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	414	429	-	-
	Cca04g00917	1219	PANTHER	SPECTRIN BETA CHAIN, BRAIN	1	1219	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1	21	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	309	387	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	1060	1172	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	486	509	-	-
	Cca04g00917	1219	MobiDBLite	consensus disorder prediction	116	156	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca04g00917	Cca-Chr4	9760127	9769657	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca04g00917	-		-	gmx:100817881	2077.37

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca04g00917	04	9760127	9769657	Cca04g00917	04	9760127	9769657	ECH