Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00912 ATGCCAAAGGTAACAGAAGAGAAAGATGGATCTGAAACGGAAAGCCTCAAACCAATAATGGATCCGTTTTCCTTTCCACATTTAGCAACCGCCAAACCTAATTTCTCCGCCAAGGGCCCTCTCCCGATGAAACGCACCGTTCGGCCCCTATTCTTGCTCCTCCTCATTCTCGTCTTCGCCGCCACGCTCACCTCACGCGCCATCGTGCGCCGCGGCATCCTCTCCATCGAGCTCGAGTCGCGCGCCCGGATccgccgacagcctccgccgccgctcaacgccacgctcctccgccacgccgccgtcgAAATCGGCGAGGAGAAGTTCAAGCACGAGGTCCAGAGCCTCCTCGACGGAAACTTCGGCGGCCAGGCGCGCCAACGCACGTTCGTCTCCTGGCGCCGCTTCATCCACCACGAGCGCGGCGTCTCCGCCGCCAACGCCAACCTACCGGCGACGCTCCGGTCGCCGCTGTTCTACCGGTACTGGCTCGACTTTCGGAAGGTTCTCCATGACTGGTTCCGGAAGCGACGATTCCAACCCGGGATCATGTCCGAGTTGACTCGGTCAGTTAAGGTTCCAATTGATTCTCACAACAAAGTAGTAACGAGTAGCAATAAATACTCCTCTTGTGCCGTGGTTGGAAACAGCGGAATTTTGCTTAATAGAGACTATGGTAGTGCAATTGACGCACATGAGGTTGTTATAAGATTGAACAATGCTAGGGTTGATCACTTTGAGGCCAAGGTTGGGAAGAAAACTAGTATTTCGTTTGTGAATAGTAACATTTTGCATTTGTGTGCTAGAAGGTCAGGGTGTTTTTGCCACCCTTATGGTGATAATGTTCCGATTGTTATGTACATTTGCCAAGCCGTGCATTTCTTGGATTACACTGTGTGCAATGCTTCTCACAAGGCTCCTTTGTTGGTTACGGATCCTAGGTTTGATGTGTTGTGTGCGAGGATTGTGAAGTACTATTCGTTGAAGAGGTTTGTGGAGGAGAGTGGGAAGGGTTTGGAGAAGTGGGGGGAGGCTCATGATGGGGCTCTTTTTCATTATTCCTCTGGGATGCAGGCTGTGATGCTTGCTTTGGGGATCTGTGATAGGGTTAGCATTTATGGGTTTGGGAAATCGACTTCTGCTAAGCATCATTACCACACTAATCAGAAGACTGAGCTTCATTTGCATGATTATGAGGCTGAGTATGCGTTCTACAGGGACCTCGTGGATGGTCACAGGCCCATACCCTTTCTCGAGGACAGGTTTAAGGTTCCTCCTGTTGTCATGCTTGAGGAAGTCTTGCCACTTGGGGCGTATTCCTCCTTGATATGA 1332 0.4842 MPKVTEEKDGSETESLKPIMDPFSFPHLATAKPNFSAKGPLPMKRTVRPLFLLLLILVFAATLTSRAIVRRGILSIELESRARIRRQPPPPLNATLLRHAAVEIGEEKFKHEVQSLLDGNFGGQARQRTFVSWRRFIHHERGVSAANANLPATLRSPLFYRYWLDFRKVLHDWFRKRRFQPGIMSELTRSVKVPIDSHNKVVTSSNKYSSCAVVGNSGILLNRDYGSAIDAHEVVIRLNNARVDHFEAKVGKKTSISFVNSNILHLCARRSGCFCHPYGDNVPIVMYICQAVHFLDYTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEESGKGLEKWGEAHDGALFHYSSGMQAVMLALGICDRVSIYGFGKSTSAKHHYHTNQKTELHLHDYEAEYAFYRDLVDGHRPIPFLEDRFKVPPVVMLEEVLPLGAYSSLI 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00912 443 Gene3D Glycosyl transferase family 29 106 413 IPR038578 -
Cca04g00912 443 Pfam Glycosyltransferase family 29 (sialyltransferase) 184 410 IPR001675 GO:0006486|GO:0008373
Cca04g00912 443 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 42 429 - -
Cca04g00912 443 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 42 429 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00912 177 375 Glycosyltransferase AT3G48820 22.549 5.49e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00912 K00786 - gmx:100789506 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00912 04 9693496 9695526 Cca04g00912 04 9693496 9695526 ECH